Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02436 ATGACTTCTCTTTCTGCCCTAAATATCTCTCTGCAATATCCTCCTGCTCGCAGAGACGACACCGTCCTTGAAGATTACCATGGCGTCAAAATTGCCGATCCTTACCGATGGCTCGAAGACCCTGATGCGGAAGAAGTGAAAGAGTTCGTACAGGAACAGGTTAAACTGACGGATTCGGTTCTTCAAAAATGCGAAACGAGAGAGAAGCTTAGGGAAGCGATAACGAAGCTTTTTGACCATCCTCGTTACCACGCGCCGTTTAGACGAGCTGATAAGTACTTCTACTTTCACAACACTGGGCTTCAGGCACAAGATATCCTTTATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGTGTTACTCGATCCCAATGGCTTCAGTGAAGACGGAACTGTGTCGCTGAGTACTCTGTCAGTAAGTGAAGATGGCAAATACTTGGCTTATGCGCTTAGTTCAAGCGGTAGCGATTGGACGACTATAAAACTGCTGCGGATTGAGGACAGAAATGTTGAGCCCGATACTTTACTGTGGGTAAAGTTCTCCTCAATTAGTTGGACGCATGACAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCAAAAGATAGAGAAGTAGAACATGCTGGGACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTACCATTTTCTGGGTACAGATCAATCAGAAGATATTTTGTGCTGGAGAGATCCTGAAAACCCCAAATATTCGTTTGGAGGAGGTGTTACTGATGATGGCCAGTATATTCTTCTCCATATTTCAGAAGGGTGCGATCCAGTCAACAAACTTTACTACTGTGACTTATCCAAAATTCCTAATGGGTTGGAAAGCTTTCGGAATGGAAATACCCTCCTCCCATTTGTCAAACTTATTGATAACTTTGATGCACAGTATGAAGCCATTGCGAATGATGATACTGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAATTAGTCCGAGTGGATTTGAAAGAACCAACTACTTGGATTGATGTCGTCCAAGAGTCAGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAACGGCAACCAACTGATAGTGAGTTACTTGAGTGATGTAAAGTATGTTCTGCAAGTTAGAGACTTAAAAACAGGTTCCTTTTTGCACCAATTACCAATTGACATTGGCTCAGTTTCTGAAGTTTCCGGGCGGCGTGAAGATAGTGTGGTTTTCATTAGCTTTACAAGTTTTTTAACTCCTGGTATCATCTACCAGTGTAACTTGGGAACAGAGATTCCTGATATGAGAATATTTCGTGAAATTGTTGTCCCAGGGTTTGATCGATCTGAATTTCATGTTAAACAGGATTTCGTGAGTAGTAAAGATGCTACCAAAATCCCAGTGTTCATTGTTGCGAAAAGGGATATTATTTTGGATGGTTCACATCCATGTTTATTATACGGATATGGTGGTTTTAACATCAGCATTACACCATATTTCAGTGTCAGTCGCATTGTAATCACAAGACATTTAGGTGTTGTTTTCTGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCACAAAGCAGGCTCGCTTGCAAGGAAGCAGAATTGCTTTGATGACTTTATTTCCGCAGCAGAATACCTTGTATCTACGGGTTATACTCAACCCAAAAAGTTATGTATTGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCCGATTTATTTGGTTGCGCTCTAGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCGTGGACCTCAGATTATGGTTGTTCAGAAAAGGAAGAAGAGTTTCATTGGCTAATCAAATACTCTCCACTACATAATGTCAGGAGACCATGGGAACAGCATACTGATCAGTCTATTCAGTACCCATCAACCATGCTGTTGACAGCTGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGTTATTAGCGACCATGCAGCATGTCCTCTGTACGAGTTTGGAACAGAGTCTCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGTCTGGACATGGTGCTGGACGTCCAACACAGAAAATGATTGATGAAGCTGCTGACCGGTACAGTTTTATGGCTAGAATGTTAGAAGCACATTGGATTGAATAG 2196 0.4194 MTSLSALNISLQYPPARRDDTVLEDYHGVKIADPYRWLEDPDAEEVKEFVQEQVKLTDSVLQKCETREKLREAITKLFDHPRYHAPFRRADKYFYFHNTGLQAQDILYVQESLEGEAEVLLDPNGFSEDGTVSLSTLSVSEDGKYLAYALSSSGSDWTTIKLLRIEDRNVEPDTLLWVKFSSISWTHDNKGFFYSRYPAPKDREVEHAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYSFGGGVTDDGQYILLHISEGCDPVNKLYYCDLSKIPNGLESFRNGNTLLPFVKLIDNFDAQYEAIANDDTVFTFLTNKDAPKYKLVRVDLKEPTTWIDVVQESEKDVLESACAVNGNQLIVSYLSDVKYVLQVRDLKTGSFLHQLPIDIGSVSEVSGRREDSVVFISFTSFLTPGIIYQCNLGTEIPDMRIFREIVVPGFDRSEFHVKQDFVSSKDATKIPVFIVAKRDIILDGSHPCLLYGYGGFNISITPYFSVSRIVITRHLGVVFCIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSEKEEEFHWLIKYSPLHNVRRPWEQHTDQSIQYPSTMLLTADHDDRVVPLHTLKLLATMQHVLCTSLEQSLQTNPIIGRIDCKSGHGAGRPTQKMIDEAADRYSFMARMLEAHWIE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02436 731 Gene3D alpha/beta hydrolase 22 721 IPR029058 -
Vian4g02436 731 SUPERFAMILY Peptidase/esterase 'gauge' domain 10 428 - -
Vian4g02436 731 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Vian4g02436 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Vian4g02436 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Vian4g02436 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Vian4g02436 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Vian4g02436 731 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Vian4g02436 731 FunFam Prolyl endopeptidase 81 440 - -
Vian4g02436 731 Pfam Prolyl oligopeptidase family 496 726 IPR001375 GO:0006508|GO:0008236
Vian4g02436 731 SUPERFAMILY alpha/beta-Hydrolases 452 676 IPR029058 -
Vian4g02436 731 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 14 429 IPR023302 GO:0004252
Vian4g02436 731 PANTHER PROLYL ENDOPEPTIDASE 8 729 - -
Vian4g02436 731 Gene3D - 81 440 - -
Vian4g02436 731 FunFam Prolyl endopeptidase 403 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02436 Vian-Chr4 41016805 41022741 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02436 4 41016805 41022741 Vian4g02436 4 41016805 41022741 ECH
Vian7g00945 7 17644544 17648535 Vian4g02436 4 41016805 41022741 PCT