Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02380 ATGAAAATGCCCACTAACTTGCTTTACTCTCAAGTTCGAGCAGTGAGTGGAGTGCAGTGGAGAGAAAAGAATATTATGTGGCTTTTGATAGTTATGTTTGCGATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCGGAGAAGGCTGTGATTGAGAAAGCAGCTACTGCATTGGATTCCTCCGATGCTTCCCACAACCAGGATAACAAGAAACCTAACTACGTCCAAATCTCTGTGGAATCCTACACACATCTGTCTAGCTTGGACGATCAAGTGAAGACATATGAGGAAAAAGTTCAGGCACTGGAGGATGAGGTCAAGGAAATTAATGAAAAGCTGTCCGCAGCAAACTCCGAGATAAATACCAAGGAAAGCATGGTAAAGCAACATGCTAAAGTTGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAATCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTGAAACTCACTGCTGAGGATCGTGCAACACATTTAGATGGCGCTCTTAAAGAGTGTATGCGACAAATCCGAAACCTTAAGGAAGAACATGATCTGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAATTAGACAAGATTAAGGGGGAGCTCGAGGCAAAGATAGCGAATTTTGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGTGAAGATAAGGCTCGTGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAAGCATGTGAAAGGGAAAACAATTCACTTAAATATGAACTACATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTCTGAGGTCTGCCGAAGCTGCTAACAAGCAGCAAATGGAGGGTGTAAAAAAAATTGCTAAGTTAGAGGCCGAGTGCCAAAGATTACGAGGTCTCGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAAGTTGAAAGCCTGGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCCCCTGTGAAGCCTGCTTCCCCTAATTTGTCTCCATTACCCGATTTCTCTCTGGAGAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGCAACAGTGAATTGCAGGCCTCAAGGAGTATGTGCGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAGTCTCAGACAAGTAACCAGCTGAAAGGATCTCCAACATCCACCGTCCAGATAACTCACGAAAGCATTTATAATCAAAATGCAAGCAGTGCACCAAGCTTGGTCTCCATGTCCGAAGATGGAAATGACGATGCAGTGAGCTGTGCTGAATCTTGGTCTACAGCAATAGTTCCTGGGCATTCCCAATTTCCTAAAGAAAAGTGCACTGAGGAATCAAGCAAATCTGAGGTCTCTAATAAGTTGGAACTAATGGATGACTTCCTGGAGGTAGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGCAGACGCCACTGTTTCAGTTTCTTCAAACAATAAGACAACTGACACTGTGACTGATGATGTATCAGAAGCCCGTATTGGCAAAGAAGGTCCGTCTGAAAAAAATGGCAATTCAAATCCACTGCCAAATAAAGTGTCTTCTGATGCTTTGATGTCTGCCCCCGATCCTCAATCTGATGCTAGTGGCTTGATGTTAACAGAACTTAGATCAAGAATATTGCTGGTTTTTGAGTCCTTATCCAAGGATGCTGACATAGGAAAGATTGTGGAGGGTATTAAACATGTGCTTGAAGATTCGCATCACATTACTATCCGCCACTCCGTGGATGCCCATCCTTCTGATGCTACGTGTGATAGGAAGGATGATCCTGAAGATGCTGGCTTAAACCTTGAAAAGGACATCATTTCATCCCAGCAACCCGGAGAACATGTGCGTATAACTTCAGATTTGGAAGCTGCAATTTGTCAGATTCACGAATTTGTACTGCTCCTTGGCAAGGAAGCAATGACATTTCATGACATCTCTTATGACGGAAATGAAATGAGGCAAAAGATTGAGGACTTCTCCGTCACATTTGATAAAATATTAAGCAACAATGCAAGTTTGGTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGCGAGTTCAGATTTAATGTTCTCGGCTACAAGGGCACAGAAGTTGAAAGTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAATTAGTACAAGACAATTCATCTGGAGAAAGATATCAAACTGGCTGTTCCCATATTCTTAGTTCGTCTTCTAATCCTGAGGTTCCCGACGACGGGAATTTGGTCTCAGGTTTTAGAGTGGATGCTGCATCACAAAAACTGTCAATGCAAAAGTTTGAAGAATTGAAACTAGAGAAAGAAAAAGTAGTGACTGATCTTTCAAATTGTACTGAAACTCTTGAAATAACCAAGTCTCAGTTGCTAGAGACTGAACAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTAGAAAATCAAACAGCTTGGCTGAGACGCAGCTAAAGTGTATGGCAGAATCGTACAAGTCTCTTGAAACACGTGCCCAGGACTTGGAAACTGATGTGAACCGTCTGCAAATTAAGATAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGAAGCTGCTTTGACTCGGAGCAAGGATCTAGAAGAGCAGTTACAAAGGATTGATTACTCGGCAGCTGATGATGACCACAAGACTTCGCATGATAGAGACTTGACAGCTGCTGCTGAAAAGCTAGCCGAGTGTCAGGAAACCATACTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCACAAACTGAGTCAATCGATTCATCGTACAGTAAGTTAAACCCGAATGATGAAGGATTCACAGAAGATGAACCCACCACCAATGGTCCAAAATTTCAAGAATTAGGGCAGATGGAGATGGACCATGCTGCTTCTGCTTTTGTTCAAAGATTGAGTTCGGAGTCTCCGTTACATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCATTCTAAATCAAAACCAAAACACAGACCCACCAAATCAGCCTCTTCTTCAGTTTCTTCTGCCACTACACCCGAGAAGCATGCAAGGGGATTCAGTAGATTCTTTTCACCAAAAGGAAAATCCGGTCATTAA 3345 0.4245 MKMPTNLLYSQVRAVSGVQWREKNIMWLLIVMFAMDRRWPWKKKSSEKAVIEKAATALDSSDASHNQDNKKPNYVQISVESYTHLSSLDDQVKTYEEKVQALEDEVKEINEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAESEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHDLKIQEVALSKTKQLDKIKGELEAKIANFEQELLRSAAENGALSRSLQERSNMLIKLSEDKARAEAEIELLKGNIEACERENNSLKYELHVVSKELEIRNEEKNMSLRSAEAANKQQMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPASPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQTSNQLKGSPTSTVQITHESIYNQNASSAPSLVSMSEDGNDDAVSCAESWSTAIVPGHSQFPKEKCTEESSKSEVSNKLELMDDFLEVEKLARLSNDSNADATVSVSSNNKTTDTVTDDVSEARIGKEGPSEKNGNSNPLPNKVSSDALMSAPDPQSDASGLMLTELRSRILLVFESLSKDADIGKIVEGIKHVLEDSHHITIRHSVDAHPSDATCDRKDDPEDAGLNLEKDIISSQQPGEHVRITSDLEAAICQIHEFVLLLGKEAMTFHDISYDGNEMRQKIEDFSVTFDKILSNNASLVQFVLDLSYVLDKASEFRFNVLGYKGTEVESNSPDCIDKIALPENKLVQDNSSGERYQTGCSHILSSSSNPEVPDDGNLVSGFRVDAASQKLSMQKFEELKLEKEKVVTDLSNCTETLEITKSQLLETEQLLAEVKSQLASARKSNSLAETQLKCMAESYKSLETRAQDLETDVNRLQIKIESLENELQDEKKAHEAALTRSKDLEEQLQRIDYSAADDDHKTSHDRDLTAAAEKLAECQETILLLGKQLNALRPQTESIDSSYSKLNPNDEGFTEDEPTTNGPKFQELGQMEMDHAASAFVQRLSSESPLHFSNSLFSPSDSESTLPARSPVQHSKSKPKHRPTKSASSSVSSATTPEKHARGFSRFFSPKGKSGH 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02380 1114 Coils Coil 855 945 - -
Vian4g02380 1114 Coils Coil 169 196 - -
Vian4g02380 1114 Pfam Filament-like plant protein, long coiled-coil 123 996 IPR008587 -
Vian4g02380 1114 Coils Coil 237 303 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 1053 1070 - -
Vian4g02380 1114 Coils Coil 202 229 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 1082 1097 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 1053 1114 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 534 552 - -
Vian4g02380 1114 Coils Coil 380 407 - -
Vian4g02380 1114 SUPERFAMILY Tropomyosin 832 1013 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 567 589 - -
Vian4g02380 1114 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 35 1109 - -
Vian4g02380 1114 Coils Coil 85 126 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 534 593 - -
Vian4g02380 1114 MobiDBLite consensus disorder prediction 993 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02380 Vian-Chr4 40496452 40501240 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02380 4 40496452 40501240 Vian4g02380 4 40496452 40501240 ECH
Vian7g00895 7 17252007 17256344 Vian4g02380 4 40496452 40501240 PCT