Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02332 ATGGCGGTGCTTCGTGGGTTGCTTTTGGTTTTCTTTGTTCTGTATGTGAGTAAAGTGCTCCATGTAGAAGCAGATGATGGTGGTGGGTTTGTGAAAACAAGAGGAGTGCAACTTACACTGAATGGAAGCCCCTTCTATGCTAATGGCTTCAATGCCTATTGGCTTATGTACATTGCCTCTGATCCTTCTCAGAGAAACAAAGTCTCTTCAGCCTTTCAACAGGCTTCAAATCATGGACTCAACATAGCCAGAACTTGGGCTTTCAGTGATGGCGGCTACAAGCCCTTACAATACTCTCCTGGATCCTACGACGAACAAGTTTTCCAGGGATTGGATTTCGCAATAGCGGAAGCAAGAAAATACGGGATCAAGCTGGTTCTGAGTTTGGTGAATAACTATGAGAACATGGGTGGCAAGAAACAGTACGTAGAATGGGCAAGGAGTCAGGGACAGTCCATAAATTCTGAAGATGACTTCTTCACAAATCCTGTGGCCAAGGGATTCTACAAAAACCATATCAAGGCTGTTCTTACAAGACGTAACAGCATCACTGGAATTGCATACAAAGACGATCCAACTATAATGGCTTGGGAACTTATGAATGAGATTAGGTGCCCTTCTGATCAATCAGGAAAAACAGTTCAGGCTTGGATTTCTGAGATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCAGGTTTGGAGGGTTTCTACGGCCAGTCAAAGCTTCAGTCCAATCCAAACTTCAATGTTGGAACTGATTTCATCGCAAACAACCAAATCCCCGGCATCGATTTCGCAACAGTTCACTCCTACCCAGACCAATGGCTATCGAGTTCAGGTTATGAAGAACAAATATCATTCTTAGAGCGGTGGGTGGATGAGCACATCCAAGATGCGCAGAACACTCTTCACAAGCCAGTTCTCTTTGCGGAGTTCGGTATTTCCACAAAAAGCTTCGGTGGCAACTCATCACCAAGGGATCGGTTATTCAACACGGTTTATTCAGCAATATACTCATCCGCAAGTAGTGGTGGTGCTGCTGTTGGTGGCTTGTTCTGGCAGCTTCTAGCTCAAGGAATGGATTCCTTTCGAGATGGTTACGAGGTGGTCTTAGATGAAAGCCCCTCAACGGCTACTTTGATCGCTCAACAGTCTCAAAAACTAAACCACATTCGCAAGATGTACGCCAGACTCAGAAACATCGAGAAATGGAATAGAGCTAAGGAAATCAGAGGCTCACAATGGCGTGTCGGTGCTAACGTTGGAAACTGA 1287 0.4507 MAVLRGLLLVFFVLYVSKVLHVEADDGGGFVKTRGVQLTLNGSPFYANGFNAYWLMYIASDPSQRNKVSSAFQQASNHGLNIARTWAFSDGGYKPLQYSPGSYDEQVFQGLDFAIAEARKYGIKLVLSLVNNYENMGGKKQYVEWARSQGQSINSEDDFFTNPVAKGFYKNHIKAVLTRRNSITGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQAWISEMASYLKSIDGNHLLEAGLEGFYGQSKLQSNPNFNVGTDFIANNQIPGIDFATVHSYPDQWLSSSGYEEQISFLERWVDEHIQDAQNTLHKPVLFAEFGISTKSFGGNSSPRDRLFNTVYSAIYSSASSGGAAVGGLFWQLLAQGMDSFRDGYEVVLDESPSTATLIAQQSQKLNHIRKMYARLRNIEKWNRAKEIRGSQWRVGANVGN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02332 428 Pfam Cellulase (glycosyl hydrolase family 5) 41 323 IPR001547 GO:0004553|GO:0071704
Vian4g02332 428 PANTHER - 8 416 IPR045053 GO:0004553
Vian4g02332 428 SUPERFAMILY (Trans)glycosidases 30 385 IPR017853 -
Vian4g02332 428 Gene3D Glycosidases 27 397 - -
Vian4g02332 428 FunFam Mannan endo-1,4-beta-mannosidase 6 27 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02332 Vian-Chr4 40065521 40068109 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02332 4 40065521 40068109 Vian4g02332 4 40065521 40068109 ECH
Vian7g00838 7 16644520 16647063 Vian4g02332 4 40065521 40068109 PCT