Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02310 ATGGCTGACCGTATCTCTGCCACTCGCCGCCACCATATCTCTGCTGGACCTCCTTTTCAGATCTCCAAAGATTTCCATGGCCCTGACAATCCCATTCCACTTTCACCGCAATGGCTTCTGCCAAAGCCTGGGGAGAGTAAACCTGCAATAGAAACTGTGGAAAACCATGTGTTTTCAACTCCACCAAATGGCAAACGCTCAGAGATGGCTAAGACATTTGGAAATGGAGAGGACGTGAATGATGGCCTTAAGCAAAAGGATGTCTTCCGGCCATCCATGCTTGACTCTGAAAGTGGACACCGTGACCATTGGCGTGATGAAGAGAGAGATACTAAGTCTTCTTCCTCTTTACACAAGGATCGGTGGAGGAATGGAAACAAAGATGTAATTGACACTAGGAGAATGGATAGGTGGACTGAAAATCCATCAACAAGGCACTTTGGCGAAGCACATCGTGGCACATCTGATAGATGGAATGATTCGGGCAATAAAGATACAAACTTTGAACAGCGGCGCATGAGTAAGTGGAACACACGCTGGGGACCTGATGATAAGGAGTCTGAAGGTCTTCGTGAAAAATGGAGTGACCCTGGTAAAGATGGTGATCTTCATCTTGGCAAAAGTTTGTCTAACATTTCTTATCTTGTTAAGGATGAAAAGGAAGGGGATCCTTATCGGCCATGGAGACCCAACGCCTCACAAAGCCATGACCACCAAAATGGGATTCCAAACAATCAAGCGTCTGCATTGTCATATGGGTGGGGCTGTGGGGAGGATACACCTCCAGTTGATGCGTTTGGGCGGGCCCGGTTTGGCTCTGGTGGTAATTCAATTAACAGCACATATATGCATTCTCAATACCCTGAAACTGTATTGGATAAAGTTGAAAGTGAACATAGAGAAGCTCACTGCTTTAGATATAATAGGACAAATTTGCTTGATGTGTACAGAGTTGCTGATATGCATACACATAGAAAACTAGTGGAATTTCTGCAGATACCTTCTATTACACAGGATGAACCATTGAAGCCTCTAGGTTTTTGTGCTCCAAATTCTGAGGAACTGTCTGTGTTAAAGGATATTGAAAAGGGGGAAATAATCAGTAGCAGTGCTCCTCAGGTGCAAAAAGATGGACGGAACACAACAGAATTTACACATTCAAGACGAATAAAGCTTGTAAATTCTCCTTTACAAGATAGAGTCGAAGATAATGGTTCTTACAGAATGGTAGATAAGGTTCCTAGTAATAGAGAATCAACCTTTGAAGAAAGTAATTCCGTTCATCCTGGTGCTACATGGCGTGGGACACCATTAGGTGAACATGCTGGCACAGTTGTGCATGAAAGCAGAGATGTGTCCAGTGATATTAAATCAAGAAACCCAGGTATGAGCTGGTCACACCAACCAAACGATACTCAGGCTCAGTGGGAGCATAATTTGGATTATTTATCTGAAACTAGAGATGTGGCTAAGTGGCAATCTAGTGGATATCCCATTAAAAGGCAGCTATCTGGCATTTTGGATGGTGAATTCGAATCCAGGAGAGTTCAACAAACTTGTCCAGAGGATTTATCACTTTTTTATAAAGATCCTCAGGGTCACATTCAGGGCCCGTTTAAAGGAATTGATATTATTGGTTGGTTTGAGGCTGGTTACTTCGGTATAGATTTACCTGTTTGTCTGGAAAATGCAGCATCCCACTCACCATGGTTGCAACTTGGTGATGCCATGCCCCACTTACGAGCTAAGGCACGACCACCACCTGGATTTTCTGCAGCAAAACATGACTCTACAGAGGCATTTTGTTGGCAAAATTCCAGTACCGTTGGGAACATGCATACTGGTTTAAATGAGGCTGAGAGGCTGAGAAATGATCCTATGCATAGGAATTCTACCACTGAAGCTGAAAATAGGTATCTGGAGTCACTAATGTCCGGTAGCAAAAGCAGTTCCCCACTTGATAGTCTCACATTATCAGAAGGTTTACAGGGGTTTCACTGTAATAATTCTGGTAATTTAGGCCCATCAGGAGTAGATGGTGGAAACGACCTTTACATGCTGGCCAAGAAGATGGCACTTGAACGGCTAAGTTCCTTGCCAACTCATCCTTATCCATACTGGCCAAGGAGGGATGCAGCACCCCTTCCGCCAAAATCAGACATTTTTCCACATACACCACCACATTCAAATATCTTGTCTTCATTGAGTGACAATCCTCGTCAGCTTCAGCCCCAAAATTCTGATTTAAACTCAGTAATCCAAGGAATATCTGACAGGACGACCACAGGCTTAAGTAGCAGTATTGCTGGATGGCCAAATTTTCCTTCGCAAGGTGGATTGGATCCCCTTCAGAATAAGATTGACTTTCATCATGATCAAAATAATGTTCAAATGCCATTTGGAATTCAACAAAGGTTACAAACACCAAACCGGTTGCCCTCAGACAACATAATTGCTCAAACTTCAGATATTCCATCAAGTATTTTGACAGCAGAGAAGTTGCTTTCTTCTGGCTTATCCCAAGATCCCCAGATGTTGAATATGTTGCAGCAGCAATACTTTCTGCAGTTGCATTCTCAGGCAGCGGCTTCTTCACAACAGATACCTTTCTTGGACAAACTTCTATTGCTGAAGCAGAAACAGCAACAGGAGGAGCAACTGCTGTTATTGCGCCAACAACAACAACTGCTATCTCAAGTGCTGCAGGACCATCAGTCTCACCAGCGCCTAGGTGATTTATCTTTTCAGCAGTTGCCTGGAGGTAGAGTACCACTGGGGAATTTGCATGTGAATCTTTCTCAAATTCTACCAAAAGAGATTTTTTCCACAAGTTCTCAAACACCAATCCCCAGTGTGAATGGTGAGCTTACTACTGATTCTTTGAATTTACCTCTGCAAGCAAGTCAGGACACTAGCTATAATCTAAGTAGTGAATCTTCTGCCCATCTACCCGACCATTTATTTGAGAATATTAGTCATCAAAAAAGCTGGAGTGCTACACTTCCTGAGCAAATTAATGACAAGCACCAGAGTGTAGCATTGCCTGCATCAGCTTCTTTTGAAGACTCCGTGTTGAGTGAGCATAACATAGCTAAAGAGGAACCCAACATTGCCCAGATACCTCTTTCTTTTTCTGACAATACTACTAAAATCATGGAGCAAATTCCATACAATACTTGTCCTGTTGGTGATTCTCAGGTGAGTGCAACTTCTGTGTTCGATGAGAGTTCTCAATCAGTACAGTTTGTTGCACCTTTTGTTCCTGTGTCTTCAGCTGGAGATTTACCAGTATCAAGTCAAGTGGGTATAGATGTGGAGATTAAATCAGGCAGTCTTGAAGAGCAGCAGGGTGGAAGAGAAAGCTCAAATACTGAAACCTCTGTGGTGGATGCAAGTAGTGTTGAAGCACGGGAACCCAAAAAGACTACTGAGAAGAAATCTAAGAAGCAAAAATCTTCAAAATCTCAGTCTTCTGATCAGGCAAAGGGCTTGCCAAAAAATGTGACTTTGCAGCAGTCAAAGAAATCAGAATCTGAGAAACCAAATTATGGTGAAAAAAAATTGGGAGAAACCAACAAGGGTGACCCAGCTCATGAGACATATCTGCAACAAACAAGGGGTAAGGGTAAACAATCTGCAACTGCTACTGCAGAAACAGATAATCATCAAGAACTTAATGGTCTCCCTACTAATATTCCAGGAAGCAACTCTGAAACATTTATTGAGGATGAGTTGAAGGCAGTCGGTTCTGTTTCCACCAAGACTAGTGAATTACCTTCAGGGAGAGCTTGGAAACCTGCTCCTGGTTTCAAGGCAAAATCTCTCTTAGAAATTCAACTGGAAGAACAAAAAAGGGCACAGATAGAAATGCTTGTGTCTGAGGTTGCTACTCCTGTCAATGCCATGAGTTCAACAACTCCTTGGGTGGGAGTTATGGCCAATCCAGACTCTTCGAAGGTGTCTAGTGATAGTCACAGAGAAGCAGATGATACTGAATATCTGGCTAAATCTGAAAAATCTCAAGATAGTAAAATCAAGAAAAGCCCATTACATGATCTATTGGCAGAAGATGTACCAGAATATAGTGAAAGAGATGGCAGGGTTCCAGACAGCTTGATCCCCTCACAAACTGTTCATTCTCATTCAGAACCAATAGATGAAGGAGACTTCATTGAAGCTAAAGACACCAAAAGAAACCGGAAAAAATCTGCAAAGTTGAAGGGTTCAGGGTCTAAGGTTTCAATTCCTGTTGCTTCTAGTGAAAGGCCCATAAGTTCGAGTCACAATGAAAAGGTAAGGAGCTCCCATTCTGTTCAACTGGAGAAAGAACAACTTCCTTCTATCCCTTCAGGACCCTCTCTTGGAGATTTTGTTCTTTGGAAAGGAGAGCTGACAAGCCCATCTCCTCCTCCAGCCTGGACTACTGATTCTGGTAGGATACCTAAACCAACATCATTAAGGGACATTCAAAAGGAGCAAGAGAAGAAATCTGCTGCAGTTCTCTCAAACCAACTTCCTACCCCTCAGAGATCACAGCCTGCCCAAGTTGCTCGGAGCAGCAGTTCTTTATGGCCAATTTCAACTTCATCTCCACCAAAAACTGCACCTTCTAGCCAGATAAACTCCCAAACTTCTGTGTCGAAATATAGAGGGGATGATGAATTCTTTTGGGGTCCAGTTGAGCAATCTAAGCAAGAAAATAAGCAATCAGGCTTCTCTCAGCTTGCTAGCCAGGGTAGCCGGGGTTCTAAAAATATCCCCATGAAAGGTAATTCACCTGGATTATCAAGTCGACAAAAGTCTGGGAGTGGCAAACCAGCTGAGCGATCTCTTTCATCGTCACCTGCCTCTTCTCAATCACTGCTAAAACTGAAAAAGGATGCCATGACTAAGAATTCCGAAGCTACGGACTTCAGAGTTTGGTGTGAGAATGAATGTGTCAGGCTTATTGGGACAAAAGATACCAGTTTCCTTCAGTTTTGCTTGAAGCAGTCCAGATCTGAAGCAGAGATTATTCTCACGGAAAACCTGGGATCATATGACCCTGATCATGAATTCATTGATAAATTCCTCAATTACATGGACTTGCTACCATCAGATGTTTTGGAAATAGCTTTTCAAACTCGGAATGATCAGAAAGTTGATGGATCTGAAAACACAGTTATACAAGATATGGGTTACGTTGACGGATCCTTCTCAAAAGGTGGAAAGAAGAAAGGTAAGAAAGGAAAAAAGGTCAGCTCTTCAGTTTTGGGATTCAATGTCGTGAGTAACCGGATAATGATGGGTGAGATTCAGGCGGTAGTTGACTAA 5313 0.428 MADRISATRRHHISAGPPFQISKDFHGPDNPIPLSPQWLLPKPGESKPAIETVENHVFSTPPNGKRSEMAKTFGNGEDVNDGLKQKDVFRPSMLDSESGHRDHWRDEERDTKSSSSLHKDRWRNGNKDVIDTRRMDRWTENPSTRHFGEAHRGTSDRWNDSGNKDTNFEQRRMSKWNTRWGPDDKESEGLREKWSDPGKDGDLHLGKSLSNISYLVKDEKEGDPYRPWRPNASQSHDHQNGIPNNQASALSYGWGCGEDTPPVDAFGRARFGSGGNSINSTYMHSQYPETVLDKVESEHREAHCFRYNRTNLLDVYRVADMHTHRKLVEFLQIPSITQDEPLKPLGFCAPNSEELSVLKDIEKGEIISSSAPQVQKDGRNTTEFTHSRRIKLVNSPLQDRVEDNGSYRMVDKVPSNRESTFEESNSVHPGATWRGTPLGEHAGTVVHESRDVSSDIKSRNPGMSWSHQPNDTQAQWEHNLDYLSETRDVAKWQSSGYPIKRQLSGILDGEFESRRVQQTCPEDLSLFYKDPQGHIQGPFKGIDIIGWFEAGYFGIDLPVCLENAASHSPWLQLGDAMPHLRAKARPPPGFSAAKHDSTEAFCWQNSSTVGNMHTGLNEAERLRNDPMHRNSTTEAENRYLESLMSGSKSSSPLDSLTLSEGLQGFHCNNSGNLGPSGVDGGNDLYMLAKKMALERLSSLPTHPYPYWPRRDAAPLPPKSDIFPHTPPHSNILSSLSDNPRQLQPQNSDLNSVIQGISDRTTTGLSSSIAGWPNFPSQGGLDPLQNKIDFHHDQNNVQMPFGIQQRLQTPNRLPSDNIIAQTSDIPSSILTAEKLLSSGLSQDPQMLNMLQQQYFLQLHSQAAASSQQIPFLDKLLLLKQKQQQEEQLLLLRQQQQLLSQVLQDHQSHQRLGDLSFQQLPGGRVPLGNLHVNLSQILPKEIFSTSSQTPIPSVNGELTTDSLNLPLQASQDTSYNLSSESSAHLPDHLFENISHQKSWSATLPEQINDKHQSVALPASASFEDSVLSEHNIAKEEPNIAQIPLSFSDNTTKIMEQIPYNTCPVGDSQVSATSVFDESSQSVQFVAPFVPVSSAGDLPVSSQVGIDVEIKSGSLEEQQGGRESSNTETSVVDASSVEAREPKKTTEKKSKKQKSSKSQSSDQAKGLPKNVTLQQSKKSESEKPNYGEKKLGETNKGDPAHETYLQQTRGKGKQSATATAETDNHQELNGLPTNIPGSNSETFIEDELKAVGSVSTKTSELPSGRAWKPAPGFKAKSLLEIQLEEQKRAQIEMLVSEVATPVNAMSSTTPWVGVMANPDSSKVSSDSHREADDTEYLAKSEKSQDSKIKKSPLHDLLAEDVPEYSERDGRVPDSLIPSQTVHSHSEPIDEGDFIEAKDTKRNRKKSAKLKGSGSKVSIPVASSERPISSSHNEKVRSSHSVQLEKEQLPSIPSGPSLGDFVLWKGELTSPSPPPAWTTDSGRIPKPTSLRDIQKEQEKKSAAVLSNQLPTPQRSQPAQVARSSSSLWPISTSSPPKTAPSSQINSQTSVSKYRGDDEFFWGPVEQSKQENKQSGFSQLASQGSRGSKNIPMKGNSPGLSSRQKSGSGKPAERSLSSSPASSQSLLKLKKDAMTKNSEATDFRVWCENECVRLIGTKDTSFLQFCLKQSRSEAEIILTENLGSYDPDHEFIDKFLNYMDLLPSDVLEIAFQTRNDQKVDGSENTVIQDMGYVDGSFSKGGKKKGKKGKKVSSSVLGFNVVSNRIMMGEIQAVVD 1770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1496 1546 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 722 746 - -
Vian4g02310 1770 SUPERFAMILY GYF domain 514 580 IPR035445 -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 415 470 - -
Vian4g02310 1770 CDD GYF 523 580 IPR003169 GO:0005515
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1 206 - -
Vian4g02310 1770 ProSiteProfiles GYF domain profile. 523 574 IPR003169 GO:0005515
Vian4g02310 1770 MobiDBLite consensus disorder prediction 456 470 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1320 1367 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 220 246 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1306 1546 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 232 246 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 80 203 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1109 1236 - -
Vian4g02310 1770 Gene3D - 512 597 IPR035445 -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 726 746 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1134 1155 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1382 1399 - -
Vian4g02310 1770 Pfam GYF domain 527 564 IPR003169 GO:0005515
Vian4g02310 1770 SMART gyf_5 524 579 IPR003169 GO:0005515
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1156 1177 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1114 1131 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1204 1236 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1178 1194 - -
Vian4g02310 1770 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1770 - -
Vian4g02310 1770 MobiDBLite consensus disorder prediction 1562 1619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02310 Vian-Chr4 39929890 39938225 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02310 4 39929890 39938225 Vian4g02310 4 39929890 39938225 ECH
Vian7g00805 7 16339149 16347185 Vian4g02310 4 39929890 39938225 PCT