Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02271 ATGAACACCAGCATCAAGCCCAAGCTGCACCATAAGAAACCTCCCATCACGCTGTCACATGAAAGGGCAGAGATGCGGGAAAGCTCGCGAGGGAGAGCGAATGGTTCAGTTAAGGGTGGAAAAACATCGAGCAAAGATAGAAAACTGGCTTTACAGAAAGATGTTGAGAGGTTGAAGAAAAGGCTTAGGCGTGAAGAGAACATACACAGAGCATTGGAGAGAGCTTTCAACAGGCCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCTCCCTACACACTAGGACTTCTTGCTGAGGTGGCAGTACTGGAAGAAGAAATTGTTAGGCTTGAGGAACAGGTTGTGCATTTCAGGCAGGACTTGTACCAGGAAGCTGTGTACATGTCATCCTCTAAGATGAAACTGGAGCAATCAGCCGGTGTGAGCAATTTAAGTCCACAGAGTAGTCCCAAACCGGTTAAAGAGGAGTCCCTTTCCCAGACACTGGAAAATGCTGCAAGATCTGAAACTATGCCTATAACAGCACTTCCAAAGGATAGACATGGAAAAGAGAACCAAACATGTACTAATTCTTCCAAGAGTAGCAAGCAGTCCATATGCAAAGGCCAGACAACCAAATCGCCGATTAAGAAACTCCCCATCGACAATAAATCACCACAGAAACGTTGGGATCCTCCAAAAAAGCAGCAAGAACTAAGGGTGAAAGACCTGCCAATTGCAGAAGTGAGAAACCATGGTCTACACGACAAACCAAAAGGGGGGGAAAGTCCAAATATAATCTCCGAAATTATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTACTGCGAAGAATTTGGATTCTGCAGGTAATGTAACACACTCATGGAGTCCAAAATCTAGTAAAAACTGCGTTGAAGGAAGTGAGTTTTGGGATCCTTATGGTATATGTTTTGAATTGGGAAAGAGGGATATTGGTCCATACAAGCAATTATGTGTAATTGAAGCCAAATCATTCGATCCAAAACGAACTGCAAAATCTTTGTTTTTACTGCACCGGTTGAAACTTCTTCTGAGAAAACTAGCCTGTGTCAACTTTGATAATCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAACATCTATAACTCATGTATGATGAATGCATACATAGAAAATGGCATACCAGAGAGTCCTGAAATGGTTGTTGCGCTGATGCAGAAGGCCACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACTATAGAACATGGCATTTTAAGACTTCCTTATCACTACAAATTTACAACATTTTCAAAGGGAGGGAAAAATCATGAAACTTATGGACTAGAATTGTCAGAACCCCTGGTGACATTTGCTCTATCCTGTGGTACTTGGTCCTCTCCTGCTGTGAGAATTTACACAGCATCTCAGGTTGAGAACGAACTTGAGATGGCCAAAAAGGAATACTTACAGGCTGCAGTTGGAATTTCGAAATCAAAGTTCCTTATCCCGAAGCTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATTTGCCTCCAATTACCAAGTGATGTGGGGAAAGAAGCCATTAAGTTCCTTGAGGAAAGAAAAACCGAGCCCCTCTCACAATTTGTACAGATTATGCCACACGAGTTCAATTTTAGATACTTGTTGTGTACATAG 1701 0.4268 MNTSIKPKLHHKKPPITLSHERAEMRESSRGRANGSVKGGKTSSKDRKLALQKDVERLKKRLRREENIHRALERAFNRPLGALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEQSAGVSNLSPQSSPKPVKEESLSQTLENAARSETMPITALPKDRHGKENQTCTNSSKSSKQSICKGQTTKSPIKKLPIDNKSPQKRWDPPKKQQELRVKDLPIAEVRNHGLHDKPKGGESPNIISEIILKCLSSILLRMSTAKNLDSAGNVTHSWSPKSSKNCVEGSEFWDPYGICFELGKRDIGPYKQLCVIEAKSFDPKRTAKSLFLLHRLKLLLRKLACVNFDNLNHQEKLAFWINIYNSCMMNAYIENGIPESPEMVVALMQKATINVGGHLLSATTIEHGILRLPYHYKFTTFSKGGKNHETYGLELSEPLVTFALSCGTWSSPAVRIYTASQVENELEMAKKEYLQAAVGISKSKFLIPKLLDWYLLDFAKDLESLLDWICLQLPSDVGKEAIKFLEERKTEPLSQFVQIMPHEFNFRYLLCT 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02271 566 MobiDBLite consensus disorder prediction 14 31 - -
Vian4g02271 566 MobiDBLite consensus disorder prediction 216 253 - -
Vian4g02271 566 MobiDBLite consensus disorder prediction 1 52 - -
Vian4g02271 566 Coils Coil 94 121 - -
Vian4g02271 566 Pfam Protein of unknown function, DUF547 363 488 IPR006869 -
Vian4g02271 566 MobiDBLite consensus disorder prediction 139 169 - -
Vian4g02271 566 MobiDBLite consensus disorder prediction 139 255 - -
Vian4g02271 566 Coils Coil 41 75 - -
Vian4g02271 566 PANTHER EXPRESSED PROTEIN 36 565 - -
Vian4g02271 566 MobiDBLite consensus disorder prediction 188 212 - -
Vian4g02271 566 Pfam Leucine-zipper of ternary complex factor MIP1 44 125 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02271 Vian-Chr4 39562797 39566365 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02271 4 39562797 39566365 Vian4g02271 4 39562797 39566365 ECH
Vian7g00765 7 15902834 15905724 Vian4g02271 4 39562797 39566365 PCT