Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02254 ATGGAGGATGTTGAAGACAAGATACCCCCTGTATTCTCTTCAAAAATTACTGAAGAGACACAACTTGCAGAACATGTTGGAGACAAGCTACCGTCTGAATCTTCTCCAAAAATTGCTAAAGAGGCTTCACTGCTGGCAGAACTTGTTGGAAACATGAGACCATATGAATCTTCTCCAAAAAATGCTGAAGAGATACTCCTGGCTGAGCTTGTTGGAGACAAGCTACCATTGGAAACTTCCCCAAACATTGCTGAAGAACCACTGGTAGAACTTGTTGGAGACAACCAACCGTCTGCATCTTCTTCCAAAATTAAAGAGACACCACCTGCTGAGTATGTGATAGAGAACTCTGAATCCTCTTCTAAAGTTGCAGAAGAGGCGACACTGGCAGAACATGTTGTCAACAAGCTACCCTCTGAATCCACCACAAATTTTTTTGAAGAGATGACACTGGTAGAACACCCTGAAGAAAACACCGAAGTGATAAAATTACCCAACAATCAATCTTCCACCGAAGCTCCAACTGTCCCACTTAGTAATGCAAAAGTGGAGTCTGGCATTCATTTACCATTGGATGGGTTCCCTGAACAAATACTTTTTCCAAATTCTAATGATTGTCAAACTGTAATGCAAGAGGGGAGTGTTTCTTTAGTTAATTCAGTTGCAAACCCAGATGCTGCATTTGATGTAACAGAGAAAAGGCAGCAGGTCACTTCAGTTGAAGAATCAAAACCAGGTGCTCTAGAAAATGTTTCTGACGGGCATTCATTGCTGGATAATGTTTCTAATATCACTGCTGACAGTGATGTTAATGATGAGATTAGGCGTTCAGCTTCTTCTTCTGAAACAAAAGATTTGCAAAATGATCACAATGAACTTTTAATGACCATGGGAACGGTTGGCTCACTCCCCCATGGCAAGATGTTTGATGAGAAAAAACACATTATCGATACCAGAGCTCCTATTAAATCTGTCAAGCAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCACAGAATCCAGACTGTGGAGAGACGTGATCTTGTAGAACATGAGCTTGAAAAGGCACAAGAGGAGATCCCAGAGTACAGAAAACAAGCAGAGGATGCTGAACAGGAAAAAGGCCAAATGCTTAAGGAGTTAGACAGTACAAAGAGATTAATAGAAGAATTAAAACTTAACCTAGAGAGAGCAGAAACAGAAGAGCGTCAAGCAAGACAGGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATTGCAGACGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCCAAAGCAAGGTATGCAGCTGCTGTTTCAGATTTAAAAGCCGTGAAAGAGGAGCAGGAAACATTGCGCAAAAATTTTTCTATCTTAGTGAGTGAAAGAGATTTAGCTATTAAGAAAGCTGAAGAGGCCGTTGCTGAATCAAAGGAAGTAGAGAAGTCTGTAGAGGATTTAACTATTGAGTTAATTGCTGCAAAAGAATCATTGGAGACTGCGCACGGTGCACACTTGGAAGCGGAGGAACAAAGAATAGGAACAGTCATGGCACGAGATCAAGATTCCCTTGATTGGGAGAAGGAACTTAAAGAGACAGAAGAAGAGCTCCAGAGACTCAACCAGCAAATTTTGTCTGCAAAGGAACTCAAATCTAAATTGGATACAGCCTCTACTTTGCTGATTGATTTGAAAGCTGAATTATCTTCTTATATGGAATCAAAGTTAAAGCAGGAAGGTGACGAAGAAGGAAACTCAGAAGGAGGCCCAGAAGAATCAGAGAAAAAGACCCACACTGACATACAAACAGCAGTTGCATCAGCCAAAAAGGAACTTGAGGAAGTGAATCTTAACATAGAGAAAGCAACCGCAGAGGTTAGTTGCTTGAAGGTAGCTGCTACATCATTAAAATCAGAACTTGAACAGGAAAAAGCAACTCTTGCCGCCATCAGGCAAAGGGAGGGAATGGCCTCCATTGCGGTTGCATCTCTGGAAGCTGAATTGGAAAAGACCAGATCAGAAATTGCTTTGGTCCAGATGAAGGAGAAAGAAGCTAAAGAGAAAATGGCCGAGCTTCCCAAGAAGTTACAAATTGCGGCTGAAGAGACTAGTCAAGCCAACTTGCTTTCTCAGGCAGCTCGTGAAGAGCTACAAAAAGTAAAGGCAGAAGCAGAGCAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGTAGATTACTTGCAGCTCAGAAGGAGATAGAGGCTGCAAGGGCGTCTGAACATTTGGCAATAGCGGCAATTAAAGCATTGCAAGAGAGTGAATCAACTAGAAGCAAGAATGCAGTGGACCCATCCAAAGGGGTAACACTTTCTTTGGAAGAGTACTACGAGCTTAGCAAACGAGCACATGAGGCAGAAGAGCGGGCCAATATGAGGGTTGCAACTGCTAATTCTGAAATTGATAAAGCTAAGGAGTCTGAATTGAAAGCCTTTGAAAAGTTGGACGAAGTGAATAGGGAGATAGCTGCAGGAAGGGAATCTTTGAAAGTGGCGATGGAAAAGGCTGAGAAGGCTAAGGAAGGTAAATTGGGCGTAGAGCAAGAATTAAGAAAGTGGAGAGCTGAAAGTGAACAACGAAGAAAGGCGGGAGACTCTGGCCAAGGAGCGGTAAACCAGAGTAAAAGTCCTAGGGGTAGTTTTGAGGGGAGTCATGAAGCAAATAATTTTGAGCGCACTGGTGTTGCAGCTAATGCTGCACATCAGTTTCCAAGTCCAAAGACTAATCTAGACATTGATGAAAGTGGATCATCCCCAGAAACAAAACAAGGGAAAAAGAAGAAAAGGTCACTTTTCCCGAGGGTTTTGATGTTCTTTGCTAGGAGAAAAACACATTCAACCAAGTGA 2910 0.4261 MEDVEDKIPPVFSSKITEETQLAEHVGDKLPSESSPKIAKEASLLAELVGNMRPYESSPKNAEEILLAELVGDKLPLETSPNIAEEPLVELVGDNQPSASSSKIKETPPAEYVIENSESSSKVAEEATLAEHVVNKLPSESTTNFFEEMTLVEHPEENTEVIKLPNNQSSTEAPTVPLSNAKVESGIHLPLDGFPEQILFPNSNDCQTVMQEGSVSLVNSVANPDAAFDVTEKRQQVTSVEESKPGALENVSDGHSLLDNVSNITADSDVNDEIRRSASSSETKDLQNDHNELLMTMGTVGSLPHGKMFDEKKHIIDTRAPIKSVKQAVSKFGGIVDWKAHRIQTVERRDLVEHELEKAQEEIPEYRKQAEDAEQEKGQMLKELDSTKRLIEELKLNLERAETEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYAAAVSDLKAVKEEQETLRKNFSILVSERDLAIKKAEEAVAESKEVEKSVEDLTIELIAAKESLETAHGAHLEAEEQRIGTVMARDQDSLDWEKELKETEEELQRLNQQILSAKELKSKLDTASTLLIDLKAELSSYMESKLKQEGDEEGNSEGGPEESEKKTHTDIQTAVASAKKELEEVNLNIEKATAEVSCLKVAATSLKSELEQEKATLAAIRQREGMASIAVASLEAELEKTRSEIALVQMKEKEAKEKMAELPKKLQIAAEETSQANLLSQAAREELQKVKAEAEQAKAGVSTLESRLLAAQKEIEAARASEHLAIAAIKALQESESTRSKNAVDPSKGVTLSLEEYYELSKRAHEAEERANMRVATANSEIDKAKESELKAFEKLDEVNREIAAGRESLKVAMEKAEKAKEGKLGVEQELRKWRAESEQRRKAGDSGQGAVNQSKSPRGSFEGSHEANNFERTGVAANAAHQFPSPKTNLDIDESGSSPETKQGKKKKRSLFPRVLMFFARRKTHSTK 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02254 969 Coils Coil 715 761 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 585 609 - -
Vian4g02254 969 Coils Coil 438 465 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 21 35 - -
Vian4g02254 969 Coils Coil 671 698 - -
Vian4g02254 969 Coils Coil 808 828 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 856 884 - -
Vian4g02254 969 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 314 962 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 923 938 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 1 36 - -
Vian4g02254 969 Coils Coil 615 663 - -
Vian4g02254 969 Coils Coil 533 577 - -
Vian4g02254 969 Pfam Weak chloroplast movement under blue light 313 881 IPR008545 -
Vian4g02254 969 Coils Coil 477 500 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 585 616 - -
Vian4g02254 969 Coils Coil 342 420 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 856 969 - -
Vian4g02254 969 Coils Coil 836 877 - -
Vian4g02254 969 MobiDBLite consensus disorder prediction 887 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02254 Vian-Chr4 39418094 39421972 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02254 4 39418094 39421972 Vian4g02254 4 39418094 39421972 ECH
Vian7g00729 7 15513986 15517229 Vian4g02254 4 39418094 39421972 PCT