Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02246 ATGGAAGACGGTGAGATAGAAGAGGGATCAATAGGTGGTGTAGAGGAAGAGGAGCATTCCTCAGAGCCTCACAAGTCGGAGGAATCGCCCTACGAAATCTTGCGCAACAGCAAGGCTTTCGTAGAGAACATCGTCGCCGACATACTCTCCATTAAAAAAGACCGAAAACCTAAACAACATCTTCGGGATCTCGCTACTCAGATGTTCTTACACTTCATCACTCTTCGCCAGGCAAATCGCTCTATCTTGCTAGAGGAAGACCGCGTCAAAACCGAAACGGAGCGTGCCAAGGCGCCGGTGGATTTCACTACGCTGCAGCTTCACAACCTCATGTACGAGAAAAACCACTATGTTAAGGCGATAAAGGCCTGCAAAGACTTCAAATCGAAATATCCTGACATTGACCTTGTTCCGGAGGAGGAGTTTTTCCGCGACGCTCCACAAGATATCAAGGACTCCGTTTTGTCGAACGACGCTGCGCACAATCTCATGCTCCGGAGGCTCAATTTCGAGCTATTCCAGCGTAAAGAACTCTGCAAACATCATGAGAAGCTGGAACTGCAGAAGAAAATCCTCTTGCAGACTATTGCAAACCGAAAGAAATTCCTGACAAGTCTCCCATCACATCTCAAATCTCTTAAGAAGGCCTCCTTGCCTGTACAAAACCAGCTCGGACTTCATCATACTAAGAGATTAAAGCAGCATCATTCTGCAGAGTTACTTCCTCCAGCCCTATACGTGATTTACTCACAGTTGTTGGCTCAAAAGGAGGCCTTTGGAGAACCCATTGATCTGGAGATTATAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGTCAACAGGCTCACAAGGACAATGACAATTCCACTACAGTGGAGAGTTCCAAATTGGAAGACGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGGAAAAGGCCACGGAGGGTTCAAGCAAAGGAGAGCCTTGACCAGGGGGGAATATTTCAAGTTCACCCACTTAAAATCATTATCCATGTGTACGAAGATCAGCATTCTGATTCAAAATCTTCCAAACTTACCTTAAGGTTTGAGTATTTGGTGAAGTTGAACGTTGTATGTGTTGGAATAGAAGGTTCTAATGAAAGTCCGGAGAATGATATATTATGTAATTTATTCCCTAATGATACGGGACTTGAGCTTCCACAGCAGTCTGCCAAACTCTTTGTTCAAGAGGCTATAGCATTCAATACTCTAAGAACTTCACGTCCTTACAAATGGGCTCAGCACTTGGCGGGGATTGAATTCTTGCCTGAGGTGTCTCCCTTACTTCTTACTGACGACAATGGAGCAGCGAAGAATGAAAATGTTATATCTGGTCTTTCACTATATCGCCAGCAGAACCGAATATCGACAGTTCTGCAGAGAATTCACGATAGAAGAAAAGCTCAATTGGCTCTTCTATCTGTTTGTGTGTATCCTGAATTTCGTACAATTTCATTCTATTTTCGAGCATCTCTGATAATCTTGCTTTACCTATTTGCTTGGGTACACTTGAGTTCTAATTTGATGAATTCTTCACCGGCTTACAGGGAACAGCTAGAATCTCTCGCAAAGCTTGACTGGCCTCGTTTGTCCTGCAGAAGTATTCCTTGGGCTTTTCACACTCCGTTGTGCAATTTGGATAGTTGGTCACCAGTAAGACTTCCACCTGTACCTAGAGAGTCCTCATCTCCTACTGTCATCGATGAAGAGGAGCATGTACAGGAACCAATGGATGCTGATGTAAATGAACGTTCTGATGTCACAAAAGCAGAACCTGAGAGTATTACAGAAGATGGGGAGCTTCCAACTTTGCTTCCTAACATGTCCAAGCTTGACCATTCCACACAGCTGAACTTAATTTCTAAAAGTATCCTTCCTCCACTCAATAAAATCAGGTCACAGAGTTTCAAAAAGTTTGATGACAGTTCTGATTTCTTGCTGGATACTGAAAGTGATCTAGATGAACCAGCGCAGACTGAACTAGAACATGAAAATACATTATCCAATTACCATGACAGAAATTCTGTATCATGGATGGATCATGGACTCAAGGAATTTTGTTTGGTTCTTTGCAGAAAAATCAGTGCAGATGAGAACAATGTGAATTTAGAAGCTAAGATAAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTGCATTGAGCGTTCGCTGTATATCTTCTGGGCAAAAGAGTGATAAGTTAGGATTAGAGTGGTATAATGAACTCCGTGCAATGGAAGCAGAGGAATGGGAATTATGGGATGGGACGGTCAATCTACACATACTGAGGATGCTACCTGTCAATCAACAAAATTATGTACTGGCTCATCAAGTTAGTTGTCTTGCTATGTTGTTCGACTATTATTTGGATGAGGCATTCCCATCGTCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGTTTATGTAAGCCTGTTACTGGTCGATTCCTGGGTAGATGTTTTAGAGGAAGGGATCGCAGGAAGATGATCTCCTGGAAAGACATGAAACTCAATTTCAGCTGTCCCCAATAG 2568 0.4315 MEDGEIEEGSIGGVEEEEHSSEPHKSEESPYEILRNSKAFVENIVADILSIKKDRKPKQHLRDLATQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCKHHEKLELQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDNDNSTTVESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIIHVYEDQHSDSKSSKLTLRFEYLVKLNVVCVGIEGSNESPENDILCNLFPNDTGLELPQQSAKLFVQEAIAFNTLRTSRPYKWAQHLAGIEFLPEVSPLLLTDDNGAAKNENVISGLSLYRQQNRISTVLQRIHDRRKAQLALLSVCVYPEFRTISFYFRASLIILLYLFAWVHLSSNLMNSSPAYREQLESLAKLDWPRLSCRSIPWAFHTPLCNLDSWSPVRLPPVPRESSSPTVIDEEEHVQEPMDADVNERSDVTKAEPESITEDGELPTLLPNMSKLDHSTQLNLISKSILPPLNKIRSQSFKKFDDSSDFLLDTESDLDEPAQTELEHENTLSNYHDRNSVSWMDHGLKEFCLVLCRKISADENNVNLEAKIKISMEYPLRPPLFALSVRCISSGQKSDKLGLEWYNELRAMEAEEWELWDGTVNLHILRMLPVNQQNYVLAHQVSCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLGRCFRGRDRRKMISWKDMKLNFSCPQ 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02246 855 MobiDBLite consensus disorder prediction 1 31 - -
Vian4g02246 855 Pfam Fms-interacting protein/Thoc5 74 430 IPR019163 -
Vian4g02246 855 MobiDBLite consensus disorder prediction 585 612 - -
Vian4g02246 855 MobiDBLite consensus disorder prediction 279 323 - -
Vian4g02246 855 MobiDBLite consensus disorder prediction 305 321 - -
Vian4g02246 855 PANTHER FMS INTERACTING PROTEIN 18 482 IPR019163 -
Vian4g02246 855 MobiDBLite consensus disorder prediction 13 31 - -
Vian4g02246 855 MobiDBLite consensus disorder prediction 585 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02246 Vian-Chr4 39363037 39368006 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02246 4 39363037 39368006 Vian4g02246 4 39363037 39368006 ECH
Vian7g00721 7 15447198 15450267 Vian4g02246 4 39363037 39368006 PCT