Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02231 ATGAGGCAGTGGATACACGTCGCGGTGGCCGCAGCCGCCGTCGGATGCGTCTCCACCCTTACGTTGGTCTTTCTCTTCCGTTGGTGTCGCAAAAGAAATGGCACGAATTTCGTTGAACCGACTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATTTCAGTTTCCAGGATCCATCAGCAACCTTTTCAGTTGGATCAGGGGAGCAAGAACGGCAACAAGGGTAATTACAATTACTATGTTTTTCGCGGCGGTGGGGTGTCGGGGAAAAGAAGCGTCTTCAATTGGGGTGATCATCCATCCATGGCTTCTGATGCTGTTGAAAATGGATGGTCACGATTTGCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGGCACTTTTGGGAGCGTGTGCCGCACCGGGAGGGAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGGCACGTGGATCTGCTGAGTTTATGCAGAAGGTCAGATTGAATCCTGGTATAAAAAAGTCTCATCAAGGCAACAACAATAATGGTTCTCTGGGCGTTGCTTCTATCATTAGAGGGGCTTTGCCTTTGCCTGGCCCTCCCCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTATTCACGTGGCGATGAGTGTGAATCTGTTGGAAAGAGTGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAAGGGAACTCCAATGGCAAAGGGAATTCCGAAGCTTTGGTTCATGTTACCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGAGAGAGTGGGAAAGGTGAATCTGTGATGTTCTCGTTGGGGTTAACAGCAGGGGGTTCTGTTCCTTTGAGAGTCCCCGGTAGCTATCCCGGCAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTACGTGAATCGGAGAAGGCAGAGTGGGTGGGAACTGATAAAGTGATCGGTTGTGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACAATAGACTCTGATCTGATGCATGTAATCCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCGATCATGGCTGCAAATATAGACATTATGGTGTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCGAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCAGCTACCTTGGGCTACGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCTCAATGGCTCAATCGCTCCACAACCAAAGGAAGCCACAATAATAATAATAACCATAACCATAATCGAACATTGGATTTTGACGAGGAGTCTGAGGCTGATCTGTTTGAAATCGTCATAGATGGTTCTGGAAAATATCCGAACACAATATCATAG 1452 0.4704 MRQWIHVAVAAAAVGCVSTLTLVFLFRWCRKRNGTNFVEPTSLTRVESVQGGISVSRIHQQPFQLDQGSKNGNKGNYNYYVFRGGGVSGKRSVFNWGDHPSMASDAVENGWSRFAFTGYKSYTPSPSKRSALLGACAAPGGSDFGRESEAEISWEVARGSAEFMQKVRLNPGIKKSHQGNNNNGSLGVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDECESVGKSGEGEKTKLLVQGNSNGKGNSEALVHVTSGNGSNKINNVEGESGKGESVMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVRESEKAEWVGTDKVIGCGFDPRQKKVFFTIDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNHNHNRTLDFDEESEADLFEIVIDGSGKYPNTIS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02231 483 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 87 471 IPR043364 GO:0098609
Vian4g02231 483 Gene3D - 176 400 IPR043136 -
Vian4g02231 483 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vian4g02231 483 Pfam SPRY domain 213 387 IPR003877 GO:0005515
Vian4g02231 483 SUPERFAMILY Concanavalin A-like lectins/glucanases 295 392 IPR013320 -
Vian4g02231 483 MobiDBLite consensus disorder prediction 438 453 - -
Vian4g02231 483 MobiDBLite consensus disorder prediction 438 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02231 Vian-Chr4 39145655 39147660 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02231 4 39145655 39147660 Vian4g02231 4 39145655 39147660 ECH
Vian7g00704 7 15260792 15263233 Vian4g02231 4 39145655 39147660 PCT