Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02224 ATGGGGGGCTGGGCAATAGCGGTGCATGGTGGCGCAGGCGTGGATCCTAATCTCCCACCGCACCGTCAGGAGCAAGCCAAACAACTCCTTACTCGCTGTCTTAATCTTGGCATCTCTGCCCTTCGTTCCAATGCTTCCGCCGTCGACGTTGTCGAACTTGTCGTACGGGAACTGGAAACGGATCCCCTGTTTAACTCGGGTCGAGGATCCGCCCTGACAGAAAAGGGAACAGTGGAAATGGAGGCAAGTATCATGGACGGTTCCAAGAGACGATGCGGCGCCGTTTCGGGCCTCACCACCGTCAAAAACCCCGTCTCACTCGCTCGCCTTGTCATGGACAAGTCTCCACATTCCTACCTCGCCTTTAACGGCGCTGAAGAATTCGCCAGACAACAGGGTGTGGAGGTAGTGGAGAACGAATACTTCATTACTCCTGAAAATGTCGGAATGCTGAAACTGGCAAAGGAGGCAAACACAATCCTGTTTGATTATCGGATTCCAACGGCTGGATACGATAGTTGCGGTGTGGGGGCCGAGAGTCCGTTGCAGATGAATGGACTGCCAATAAGCGTGTACGCGCCGGAGACGGTGGGGTGTGTGGTGGTGGACAAGGAGGGGAGGTGTGCGGCTGCGACGTCGACAGGAGGTTTGATGAACAAGAAGAGTGGAAGAATCGGTGACTCGCCTCTGATAGGTGCAGGGACTTACGCTTGTGGAGTGTGTGGGGTTTCGTGCACTGGGGAAGGTGAAGCTATCATACGAGGCACGCTGGCGCGTGAGGTGGCTGCAGTGATGGAATACAAAGGACTGCCACTGCAGCAGGCTGTGGACTTTGTGATCAAGCACCGCCTGGACGAAGGGAAAGCAGGGCTGATCGCCGTCTCAAATACCGGTGACGTCGCTTATGGCTTCAACTGTAACGCCATGTTCAGGGGCTGCGCCACCGAGGACGGATTCATGGAGGTCGGAATCTGGGACTAG 981 0.5576 MGGWAIAVHGGAGVDPNLPPHRQEQAKQLLTRCLNLGISALRSNASAVDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGSKRRCGAVSGLTTVKNPVSLARLVMDKSPHSYLAFNGAEEFARQQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTAGYDSCGVGAESPLQMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKKSGRIGDSPLIGAGTYACGVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLPLQQAVDFVIKHRLDEGKAGLIAVSNTGDVAYGFNCNAMFRGCATEDGFMEVGIWD 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02224 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Vian4g02224 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Vian4g02224 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Vian4g02224 326 CDD Asparaginase_2 5 318 - -
Vian4g02224 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Vian4g02224 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02224 Vian-Chr4 39039498 39041238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02224 6 260 Miscellaneous Gene Families AT4G00590 28.777 1.56e-16 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02224 4 39039498 39041238 Vian4g02224 4 39039498 39041238 ECH
Vian7g00692 7 15092981 15094500 Vian4g02224 4 39039498 39041238 PCT