Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02223 ATGTTGCTACTGTTGCTATTCCTGATTCAACCCCGCCCAGTGAAGCCACAGGGCTACGGTAGGAACATATTCATATTAGCGGGTCAAAGCAACATGGCGGGTCGGGGCGGCGTAATCAACGACACGGCCACCGGGGTGACAACATGGGACGGCGTCGTTCCACCCCAGTGCCGTTCCAACCCCTCCATTTTGAAGCTCGACGCGCACCTGGTGTGGGTGGAAGCGCGTGAGCCGCTCCACGCGGACATCGATTATAAGAAGACCAACGGAGTGGGTCCAGGAATGGCATTCGCAAACTCGGTGTTGGGAAAACACCCAGAATTTGGTGTAATCGGTTTGGTCCCTTGCGCGATCGGAGGCACCACCATAAGCGAGTGGGAACGTGGAAAAGAGCTTTACAGTGAGACGATAAAGCGTTCGAAGGCATCGATGCGTGACGGTGGCACCATTCGTGGCTTGCTTTGGTACCAAGGGGAAACCGATACGGTGAACCTACACGATGCACAGTTGTACCAACGACGACTCCACAAGTTCTTCTTGGATGTTCGTGATGATCTGCAGTCTCCATTGCTTCCTATTATCCAGGTAGCATTGGCATCTGGATCAGGCCCTTACATAGAGATAGTGAGACAAGCCCAACTGGGCACTGACCTCCTCAACCTGAGGACTGTGGACGCACATGGTTTGCCTCTTCAGCCCGATGGGCTACACCTCTCCACTCCGGCCCAGGCTCATCTTGGACAAATGATGGCTGATGCGTTCCTTCAGTTCGTACCCTCTTCAAACTTAAATTACAATCTCAGCCCAATTCGTAACGAGGCCATAAGGCTTTACAACTGTACCTTTTGTGTTTACAAGCTTCCCTTGTTCATGACACTTCTCTCAATTTTGCACAAATCTGTCCTATAG 909 0.5204 MLLLLLFLIQPRPVKPQGYGRNIFILAGQSNMAGRGGVINDTATGVTTWDGVVPPQCRSNPSILKLDAHLVWVEAREPLHADIDYKKTNGVGPGMAFANSVLGKHPEFGVIGLVPCAIGGTTISEWERGKELYSETIKRSKASMRDGGTIRGLLWYQGETDTVNLHDAQLYQRRLHKFFLDVRDDLQSPLLPIIQVALASGSGPYIEIVRQAQLGTDLLNLRTVDAHGLPLQPDGLHLSTPAQAHLGQMMADAFLQFVPSSNLNYNLSPIRNEAIRLYNCTFCVYKLPLFMTLLSILHKSVL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02223 302 SUPERFAMILY SGNH hydrolase 22 266 - -
Vian4g02223 302 Gene3D SGNH hydrolase 21 258 IPR036514 -
Vian4g02223 302 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 17 262 - -
Vian4g02223 302 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 22 256 IPR005181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02223 Vian-Chr4 39030979 39033639 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02223 4 39030979 39033639 Vian4g02223 4 39030979 39033639 ECH
Vian7g00691 7 15086753 15087619 Vian4g02223 4 39030979 39033639 PCT