Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian4g00748 | ATGCTCGAAAATAAGGACCCTGCAATTAGGCTCTTCGGCCAGAAGATTGCCTTTTCCGGAGAACCCGACGCTCCGACCATTGCCGCCGCTCACACCCCCTCGCCACCGCCGCCGGTGGATGTTGTCAGAGACGCAGAAGAAGAAGGAGAAGAAGAAGTAGATGACGACGTTGCTGACTCAGAGGCTGAAGATGATGACAACAAAGACAAGGATCCTGCAGAAGAAGTTAGTGAGAAAACGAAAGAAGCTGATCTTCCTCTAAATGCTGCAGACTCTAATAACACCGCAGAGGGTCTTCAGAATCCAAACACACCTTCCATAGACGAAGAATCTGCAAAGTCAAAATCCAACAAGTCAGAAAACGATCAAACCGATCCAACCACAACAGTTGCTGCTACTGAAACCAACAACTCACCAGACAACAACAATAAAACGCTGAAAAAACCAGACAAAATTCTTCCATGTCCTCGCTGCAATAGCATGGACACCAAATTCTGTTACTACAACAACTACAATGTGAACCAGCCACGTTACTTCTGCAAAGCGTGCCAAAGGTACTGGACCGCCGGGGGCACCATGCGAAACGTGCCGGTGGGTGCAGGGAGGAGAAAGAACAAAAACTCAGCCTCTCACTATCGCCATATCACAATCTCTGAAGCACTTCAAGCTGCAAGAATCGATTCCCCAAACGCGACTCATCTTTTGAAGCCCAATGGGAGAGTCCTCAGCTTTGGTATAGACCCTCCAATTTGTGATTCCATGGCATCAGTCCTGAACCTCGCGGAGAAGAAAACAAGAAACGGGTTTCACTCCATGGAGGATCAGAGAAACAAAGATGATGACTGCTCGAGTGCATCATCCATCACCGTTTCCAATGAAGAAAGTGGGAAAAGCACGTCACAAGAATCATTGGTGCCTAACAACAACAGTTTCATACATCATCATCATCACCATGTTCCGTGCATCTCCACCGTTCCTTGGGCTTATCCTTGGAACTCCGGGGTTCCCTCAGCACCTGCTATGTGCCCTCCAGGGTTTCCCATGTCATTTTACCCTCATGCATTTTGGAACATTCCATGGTTTCCCACACACCATGCTGCCCCAGCTCCAAGGTCTCCGGGTTCTGGTCCAAATTCTCCCACTCTCGGGAAACACTCCAGGGACGATGACTTGGCGAAGCAAGAGCACGTCCACGAGGAACCCTCGAGGCAGAGAAACGGGTCTGTTTTGGTGCCCAAAACTTTGAGAATCGATGACCCCAGTGAGGCAGCCAAGAGTTCAATATGGGCAACTTTAGGGATCAAGAACGAGTGTGTGAGTGGGGGTGGCATGTTCAAGGGGTTCCAATCAAAGAAAGAAGAGAAAGACCGTGTCATTGAAACCTCTCCTGTGTTGAGGGCCAACCCTGCAGCCTTGTCTAGATCCCTTAACTTTCACGGGAACTCTTGA | 1449 | 0.4914 | MLENKDPAIRLFGQKIAFSGEPDAPTIAAAHTPSPPPPVDVVRDAEEEGEEEVDDDVADSEAEDDDNKDKDPAEEVSEKTKEADLPLNAADSNNTAEGLQNPNTPSIDEESAKSKSNKSENDQTDPTTTVAATETNNSPDNNNKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDSPNATHLLKPNGRVLSFGIDPPICDSMASVLNLAEKKTRNGFHSMEDQRNKDDDCSSASSITVSNEESGKSTSQESLVPNNNSFIHHHHHHVPCISTVPWAYPWNSGVPSAPAMCPPGFPMSFYPHAFWNIPWFPTHHAAPAPRSPGSGPNSPTLGKHSRDDDLAKQEHVHEEPSRQRNGSVLVPKTLRIDDPSEAAKSSIWATLGIKNECVSGGGMFKGFQSKKEEKDRVIETSPVLRANPAALSRSLNFHGNS | 482 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 383 | 403 | - | - | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 121 | 143 | - | - | |
Vian4g00748 | 482 | ProSiteProfiles | Zinc finger Dof-type profile. | 153 | 207 | IPR003851 | GO:0003677|GO:0006355 | |
Vian4g00748 | 482 | Pfam | Dof domain, zinc finger | 150 | 207 | IPR003851 | GO:0003677|GO:0006355 | |
Vian4g00748 | 482 | ProSitePatterns | Zinc finger Dof-type signature. | 155 | 191 | IPR003851 | GO:0003677|GO:0006355 | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 44 | 71 | - | - | |
Vian4g00748 | 482 | PANTHER | CYCLIC DOF FACTOR 2 | 4 | 480 | IPR045174 | GO:0003700|GO:0006355 | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 20 | 149 | - | - | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 367 | 414 | - | - | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 270 | 309 | - | - | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 87 | 110 | - | - | |
Vian4g00748 | 482 | MobiDBLite | consensus disorder prediction | 282 | 309 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian4g00748 | Vian-Chr4 | 9569396 | 9571978 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian4g00748 | 1 | 479 | C2C2-Dof Transcription Factor Family | AT3G47500 | 46.479 | 2.17e-121 | 360 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Vian4g00748 | zf-Dof | 2.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian4g00748 | - | - | gsj:114409713 | 676.011 |