Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00187 ATGTCTACTAGAACAAGAGAAAATGATGAGGCCGAACCTCAAAGAGGGTATTGGAGATGGAGCAAACAAGATTTCTTGCCAGAGGAGTCCTTCCAAAGCTGGAACAACTACGTTTCTGCGCTCTCACAAACATGGCTAAGGTTCAAGGATCGTCTCTTCAGCAGATCAGATGATGCCACCGAGACAGAAGAGCTCAAGAAACAAAGTGAGCATGACATGAAACGTTGCCTCAACTGGTGGGATCTCATATGGTTCGGTTTTGGTGCAGTGATTGGAGCAGGAATCTTTGTGCTCACTGGTCAAGAGGCTCATGACCATGCTGGAGCAGCAATTGTTTTATCCTATGTTGCCTCAGGCTTCTCAGCAATGCTTTCTGTTTTCTGCTACACTGAGTTTGCCGTAGAAGTTCCATCAGCAGGAGGGTCGTTTGCTTATCTGAGAGTTGAATTAGGAGACTTTGTTGCTTTCATAACAGCTGGAAACATTCTTCTTGAAAGTGTTATTGGAAGTGCAGCAGTGGCCAGATCATGGACTTCTTACTTCACAAACCTTTTGAACCGTCCAAAGAATTCATTGCGCATTAAAACAAATCTCAAAGAGGGGTACAACTTGTTGGACCCTATAGCTTCTGGGGTTCTGGTGATTGCTTCAGTGATCACAATAATCAGCACAAGAAAAACTTCATTCCTCAATTGGATAGCTTCTGCCATCAACACCGCTGTTATTATATTTGTGATTATTGCAGGGTTTCTTCATGCAGACACATCAAACTTGTCACCCTTTTTACCTTACGGCGCTAAGGGAGTGTTTCAGGCTGCAGCAATTATTTACTTTGCATATGGAGGGTTTGACAGTATTGCAACCATGGCTGAAGAAACCAAGAAACCATCAAGGGACATTCCAATAGGTTTGTTGGGGTCAATGTCCATGATCACGGTGATTTATTGCTTGATGGCACTCTCACTGAGCATGATGCAGAAGTACACAGAAATAGACACTGGAGCCGCTTTCTCAATTGCATTTCAGAGCGTGGGAATGAAGTGGGCAAAGTATGTGGTTGCATTTGGTGCATTGAAGGGGATGACCACAGTGCTTCTGGTGGCTAGATTGTCACAGGCACGTTATATTACTCATATTGCAAGGTGCCACATGATCCCACCATGGTTTGCTCTCGTGCACCCTAAGACAGGAACCCCTATAAATGCTACACTCTTGATCACTGTTGCAAGTGCCATCATAGCCTTTTTCACAGGTTTGGATGTCTTGTCAAGCTTGATATCTGTGAGCACACTCTTTGTGTTCATGATGATATCTGCAGCCCTTTTGGTTAGGAGGTACTATGTGAGAGGGGTGACATCAAGAGAGAATCTTGTAAAGCTAGTTATGTTCTTGGTGATCATTATTGGATCCTCAATGGGAATTTCAGCATTCTGGGGGCTGAAGCCTAATGGTTGGGTAGGATACACTGTGACTGTTCCTGTTTGGTTCTTGGGAACACTTGGTATGTCACTGTTTTTGACTCAGCAAAGGGTGCCAAAAGTTTGGGGAGTTCCATTTGTGCCATGGTTGCCATCTTTGTCAATAGCAACAAATGTGTTCCTGATGGGATCTTTGGAGTATGATGCATTCATAAGATTTGGAGTGTGCACAGTGGTAATGCTGATATACTATTTTCTCTTTGGTCTCCATGCAACTTATGATATGGCTCACCAACAACAAATGCTGAAATCAAAAGTCGACCACACAGAAACCATCTAG 1758 0.4369 MSTRTRENDEAEPQRGYWRWSKQDFLPEESFQSWNNYVSALSQTWLRFKDRLFSRSDDATETEELKKQSEHDMKRCLNWWDLIWFGFGAVIGAGIFVLTGQEAHDHAGAAIVLSYVASGFSAMLSVFCYTEFAVEVPSAGGSFAYLRVELGDFVAFITAGNILLESVIGSAAVARSWTSYFTNLLNRPKNSLRIKTNLKEGYNLLDPIASGVLVIASVITIISTRKTSFLNWIASAINTAVIIFVIIAGFLHADTSNLSPFLPYGAKGVFQAAAIIYFAYGGFDSIATMAEETKKPSRDIPIGLLGSMSMITVIYCLMALSLSMMQKYTEIDTGAAFSIAFQSVGMKWAKYVVAFGALKGMTTVLLVARLSQARYITHIARCHMIPPWFALVHPKTGTPINATLLITVASAIIAFFTGLDVLSSLISVSTLFVFMMISAALLVRRYYVRGVTSRENLVKLVMFLVIIIGSSMGISAFWGLKPNGWVGYTVTVPVWFLGTLGMSLFLTQQRVPKVWGVPFVPWLPSLSIATNVFLMGSLEYDAFIRFGVCTVVMLIYYFLFGLHATYDMAHQQQMLKSKVDHTETI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00187 585 Gene3D Amino acid/polyamine transporter I 71 505 - -
Vian4g00187 585 PIRSF AA_transporter 53 582 - -
Vian4g00187 585 FunFam Cationic amino acid transporter 5 71 505 - -
Vian4g00187 585 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 60 566 - -
Vian4g00187 585 Pfam Amino acid permease 77 482 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian4g00187 585 Pfam C-terminus of AA_permease 515 564 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00187 Vian-Chr4 1697179 1698936 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00187 4 1697179 1698936 Vian4g00187 4 1697179 1698936 ECH