Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00915 ATGGAAGTTCAATCAGAGCAAAAATGGATGGACAATGGACCCTCTCGCCGGGCCAAATGGTGGTACTCAACTTTCCACACTGTGACAGCCATGATAGGTGCTGGTGTTCTCAGCCTGCCCAATGCCATGGCATATCTTGGATGGGGCCCAGGGATCTTGATGTTGTTGTTATCATGGTGCCTGACCTTAAACACAATGTGGCAAATGATACAGTTGCATGAGTGTGTTCCTGGAACTCGTTTTGATCGCTACCTTGATCTTGGTAGACATGCTTTTGGACCAAAACTTGGGCCATGGATTGTGCTCCCCCAGCAGCTAATAGTCCAGGTTGGGTGTGATATTGTCTACATGGTTACTGGGGGGAAGTGCCTAAAGAAGTTCATGGAGATAGCATGCATCGATTGCACACAACTCAAACAGTCTTACTGGATTCTGGTCTTTGGGTCCATCCATTTCTTTCTTTCTCAGCTTCCCAATTTCAATTCTGTTGCTGGGGTTTCTTTAGCTGCAGCACTAATGTCATTAAGCTATTCAACGATAGCTTGGTTGGCTTGCTTGACTAGAGGTCGGATTGAGAATGTTAGCTATGCTTACAAGAGAAGCAGCAACACTGAGTTCGTGTTCCGGGTCTTCAATGCGCTGGGTCAAATCTCATTTGCATTTGCTGGCCATGCAGTGGCCCTTGAGATTCAGGCTACAATTCCATCGACCCCTGAGAAACCATCAAAGATACCAATGTGGCACGGTGCTCTCGGTGCCTATTTTATTAATGCAATATGCTATTTCCCAGTTGCACTCATAGGATACTGGGCATTTGGGCAAGTTGTTGAGGATAATGTGCTTATGGCACTAGAAAGGCCTGCATGGCTTATTGCCTCTGCTAACTTGATGGTCTTTGTCCATGTTGTCGGTAGCTACCAGGTCTATGCTATGCCTGTTTTTGACTTGATTGAGAGATTGATGACCAGAAGATTGAACTTCCCTTCAGGATTAGCACTCAGACTCGTTTCTCGATCTGCTTATGTTGCTTTTACGTTATTCATTGGGGTCACTTTTCCTTTCTTTGGCGATCTTCTTGGGTTCTTTGGTGGATTTGGTTTTGCTCCCACTTCATATTTTCTTCCTAGTATAATGTGGCTGATAATCAAGAAGCCAAGAAGATTCAGCATCAACTGGTTCATCAATTGGGCTGCAATATACATAGGAGTGTGCATTATGTTGGCATCAACTATTGGTGGCTTGAGGAATATCGCTGTTGATGCCTCTAGTTATAGTTTCTATACCTAA 1287 0.446 MEVQSEQKWMDNGPSRRAKWWYSTFHTVTAMIGAGVLSLPNAMAYLGWGPGILMLLLSWCLTLNTMWQMIQLHECVPGTRFDRYLDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACIDCTQLKQSYWILVFGSIHFFLSQLPNFNSVAGVSLAAALMSLSYSTIAWLACLTRGRIENVSYAYKRSSNTEFVFRVFNALGQISFAFAGHAVALEIQATIPSTPEKPSKIPMWHGALGAYFINAICYFPVALIGYWAFGQVVEDNVLMALERPAWLIASANLMVFVHVVGSYQVYAMPVFDLIERLMTRRLNFPSGLALRLVSRSAYVAFTLFIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPRRFSINWFINWAAIYIGVCIMLASTIGGLRNIAVDASSYSFYT 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00915 428 PANTHER OS05G0424000 PROTEIN-RELATED 18 413 - -
Vian3g00915 428 FunFam Lysine histidine transporter 1 13 423 - -
Vian3g00915 428 Pfam Transmembrane amino acid transporter protein 17 412 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00915 Vian-Chr3 9962698 9965554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00915 2 427 Organic Solute Cotransporters AT1G25530 76.291 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00915 3 9962698 9965554 Vian3g00915 3 9962698 9965554 ECH