Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00902 ATGAAGAGTATCAAGACCGTTGGCCATGCCATATTTGTCATTTTCATCCTCTGCCTGAGTGCAAGATGCTGTGGACAAGAAGACCTTGATATTGCTCCAATGGAGAAAGCAGAGCAAGAAGCTCTGTACTCCACCATTCAAGGCTTTGTTGGTAATTCCTGGAATGGCTCAGATCTCTATCCGGATCCTTGTGGTTGGACTCCAATTCAGGGTGTCTCTTGTGATCTGTTTAATGGGTTTTGGTATGTTACTGTCTTGAACATCGGACCCGTCCATGACAATTCTCTGAGTTGTGCTCAAGATTTGGAGTTTAGGCCAGAGTTATTCTCGCTCAAGCACCTAAAATCTCTATCCTTCTTCAATTGCTTTCAATCAAAAAATAGCTTTCCAGCTACCATTCCCGCTAGAAACTGGGAAAAACTTGCCAGCAGCTTAGAGACACTAGAGTTTAGATCAAATCCAGGTCTCATTGGAAACATTCCCTCAGGTTTTGGTGTCCTCAAGAACCTCCGATCACTAGTATTACTAGAAAACGGTGTAACAGGTGAAATACCATCAAGCATTGGCAATCTCGTGAAGTTGAAGAAGCTTGTTCTTGCTGAAAACTACCTTAATGGGAGGATCCCAGATGTTTTTGATGGGATGAACGAGTTATTAATCTTTGATTTGAGCAGTAATTCGTTATCGGGGTCTTTGCCTTCAACACTCGGAAGCTTAACTTCAGCATTGAAGCTTGATGTGAGCCACAATGACCTTGAAGGGACTCTTCTAAAGGAGTTTGCTAATCTTAAGAATCTGACCCTTATGGACCTTAGGAATAACAAATTGAGTGGTGGATTGACCTTGTCTTTGCAAGAGATGCAGTCATTAGAGGAATTGGTTATGTCCAACAATCCATTAGGTGGAGACATGAGGGCATTAGAGTGGGAAAACATGAAGAACTTGGAAATTTTGGAACTCTCTAACATGGGGTTGACAGGGGAAATTCCTGAGTCTATCTCAGAATTGAAGAGGCTCAGATTTTTGGGACTTAGTAACAACAAGCTCACTGGCAATCTGTCACCAAAGCTGGAAACTCTTCCTTGTCTCAATGCACTTTACCTAAGTGGAAACAATATCACAGGAGAGATTAACTTCTCGAAAGAGTTTTTGGAAAAAATGGGAAGGCGTTTTGGGGCGTGGAGAAACCCCAACCTTTGCTACCAAGTTGGAGTAATTTCAACAAACCATGTTCCATATGGGGCCGGTCTTGCCGTCGCGGCGCTGATCCGATTCAATAAAGACGTGTTCGTGGGTCAGGTTATGATGGGCCCAACCGTGCGGGCTTTGGTGTCGATGGGCTATGTTCACTCGGTAGAGGTGTTGTGCTCGCTGATCAGGTCTATTAGGTCTCCTCTCGTGGACGAGATCGAATCGAACGGCGAGATTCCGAGGGTGATAGTGCTGTTGAATTCCCGCGATTTGCAGCTGCAGGTGCTGGCGTTGGAGTGTGTGTTGGAGATTGGGTACTTCGGACGCAAGGAAGCGGTGGAGGCTATGGTGAAGGAGGGGTTGGTGGAGAAGCTGGTAGAGTTGCAGAGGTCGGAGAACGGTGGCGATTTGATTGAGATTGGGAAAGAAAGAGTTTGTGGGGTTTTGGAAAGACGCCCTTTTGCGAGCTGCGTAGCAAAGTTTGCGGTGCAGTTGGAGGTTGGGGAAGGGCTGCGACAGAGAGAGAAGAGGGCAGTTAAACCGGAGATTTTGGTGAGAGTCAGAGAAGCTTCTCTTTTTGATGCCGAAGTGCCACCATTGCTGCTGAAGTTTTGTGGGGTTCTTCGCCATAGATTATTTTCTGCAAACAAGACGGAGAATATAAAAACCAGTACACTTCAGTAA 1875 0.4555 MKSIKTVGHAIFVIFILCLSARCCGQEDLDIAPMEKAEQEALYSTIQGFVGNSWNGSDLYPDPCGWTPIQGVSCDLFNGFWYVTVLNIGPVHDNSLSCAQDLEFRPELFSLKHLKSLSFFNCFQSKNSFPATIPARNWEKLASSLETLEFRSNPGLIGNIPSGFGVLKNLRSLVLLENGVTGEIPSSIGNLVKLKKLVLAENYLNGRIPDVFDGMNELLIFDLSSNSLSGSLPSTLGSLTSALKLDVSHNDLEGTLLKEFANLKNLTLMDLRNNKLSGGLTLSLQEMQSLEELVMSNNPLGGDMRALEWENMKNLEILELSNMGLTGEIPESISELKRLRFLGLSNNKLTGNLSPKLETLPCLNALYLSGNNITGEINFSKEFLEKMGRRFGAWRNPNLCYQVGVISTNHVPYGAGLAVAALIRFNKDVFVGQVMMGPTVRALVSMGYVHSVEVLCSLIRSIRSPLVDEIESNGEIPRVIVLLNSRDLQLQVLALECVLEIGYFGRKEAVEAMVKEGLVEKLVELQRSENGGDLIEIGKERVCGVLERRPFASCVAKFAVQLEVGEGLRQREKRAVKPEILVRVREASLFDAEVPPLLLKFCGVLRHRLFSANKTENIKTSTLQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00902 624 SUPERFAMILY L domain-like 44 378 - -
Vian3g00902 624 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Vian3g00902 624 Gene3D Ribonuclease Inhibitor 36 211 IPR032675 -
Vian3g00902 624 FunFam Piriformospora indica-insensitive protein 2 37 208 - -
Vian3g00902 624 Gene3D Ribonuclease Inhibitor 212 306 IPR032675 -
Vian3g00902 624 Gene3D - 432 543 IPR011989 -
Vian3g00902 624 FunFam Piriformospora indica-insensitive protein 2 306 407 - -
Vian3g00902 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 241 IPR046959 -
Vian3g00902 624 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Vian3g00902 624 SUPERFAMILY ARM repeat 451 530 IPR016024 -
Vian3g00902 624 FunFam Piriformospora indica-insensitive protein 2 209 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00902 Vian-Chr3 9745301 9754430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00902 144 405 Receptor kinase-like Gene Family AT4G08850 29.658 4.55e-20 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00902 3 9745301 9754430 Vian3g00902 3 9745301 9754430 ECH