Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00899 ATGACTGACATCACTGATGATGTGGCTGAGGAAATCTCCTTCCAGAGCTTCGACGATGACTGCAGGTTGCTCGGGAATCTCCTCAACGACATTCTCCAGCGCGAGGTTGGCACCAACTTAGTTGACAAGATCGAAAGGATTCGAGTCCTTGCTCAGAGTGGTTGTAATATGAGGCAGGCGGGTATTTTGAACATGGCAGAGCTGCTTGAGAAGCAGTTGGCTTCGGAGTTGTCGAAGATGACACTGGAAGAAGCTTTCACCCTTGCTCGTGCCTTCAGCCATTATCTTACTTTGATGGGCATAGCTGAGACCCATCACAGGGTTCGTAAAGGAGGGAATGTGGCACAAATTGCAAAATCTTGCGATGATATATTTAACCAGCTGGTGCAGGGTGGAGTTTCCCCAGAAGAACTTTATGACACAGTCTGCAAGCAGGAAGTGGAAATTGTTCTCACGGCTCATCCCACACAGATTAACCGTCGGACCTTACAATTCAAGCACGTTAGAATCGCTCATCTTTTGGATTATAATGATCGACCCGATCTTAGCACTGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAACTGAGGCGCCAAAAGCCCACACCAGTAGACGAAGCTAGAGCTGGTTTCAACATTGTGGACCAGTCACTATGGAAAGCTGTCCCTCATTACTTACGACGTGTTAGCAATGCTCTAAAGAAGCATACAGGAAAGCCACTTCCCTTGACCTGCACTCCCATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGGAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTTCACTTCTATCTAGATGGATGGCAATTGATCTCTATATAAGGGAAGTGGACAGCCTCAGATTTGAGCTATCCATGAACCAGTGCAGTGATAGGCTGTCAAGACTGGCACACGACATTCTAGAAGCTAAACGTGATAATCCCCGTGAGAATTGGAACCAATCCGTGAATAGAAGTCCCGCACTCCCAACACAACTTCCAGCTAGAGCTCATTTACCTTCCATTGCTGAAAATGGTGAATCTCGGCATCCTAGACTAGACATTCCAGGACCTGATCACATGCAATCTAATCACAAGGATGGTGGAGCTGCCTTAAGTTCAACTACATCGAAAAATGCCAATTCCAATATTCAATCTCAAGGAACAAGTTCAGCAAATTCCAGTGCTTCTTCAGCTACAACTTCATCTTCTTTTGTTCAAAAGAAATTGTATGCAGAACCCCAGACAGGAAAGTCCACTTTTCAGAAGCTTTTAGAGCCAATGCTGCCTCAACTTCCTGGAATTGCTCCGTATAGAATTGTCCTGGGGAATGTTAAGGATAAGCTTGAGAGAAGTCGTAGACGATTAGAACTACTTCTTGAGGATGTTGCTTGTGACTATGAACCTTCGGAGTACTATGAAACATCTGATCAGCTTTTGGAACCTCTGCTTCTCTGTTACGAGTCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATTTGATTCGTAGAGTTGCTACCTTTGGAATGGTGTTGATGAAGCTTGACTTGCGTCAGGAATCTGGGAGGCACGCAGAAGCACTTGATGCAATAACAGAGTATTTAGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAGTTGGACTTTTTAACAAAAGAACTGAAAGGGAAGAGGCCTCTAGTTCCTCTTAGTATAGAGGTTCCTTCTGATGTTAAAGAAGTCTTGGATACATTCCGAATTGCTGCTGAACTAGGAAGTGATTCACTAGGAGCTTATGTGATCTCTATGGCCTCAAATGCAAGTGATGTCCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGGCTTGCTGCTATTGGAGAGTCAGGGAAAGCATGTCCTGGTGGAACGTTGCGAGTGGTACCTCTGTTTGAAACCGTGAAAGATCTGAGAGGAGCTGGTGCTGTTATCCGAAAACTTTTATCAATAGACTGGTACCGTGAACACATCATTAAGAACCACAACGGACATCAAGAGGTTATGGTTGGATATTCTGATTCGGGTAAAGACGCTGGTCGCTTTACTGCTGCCTGGGAACTTTTCAAAGCTCAGGAGGATGTTGTAGCGGCATGCAATGATTATGGGATAAAGGTTACACTATTCCATGGCCGTGGAGGCAGTATTGGTCGTGGTGGAGGGCCAACATATCTGGCTATTCAGTCCCAGCCCCCTGGGTCTGTGATGGGAACCCTTCGGTCTACTGAGCAGGGAGAGATGGTGGAGGCGAAGTTTGGGTTGCCACAAATAGCTGTTAGACAACTTGAGATATACACAACAGCGGTGCTACTTGCAACCCTTCGTCCTCCTATTCCACCCAGAGAAGAAAAATGGCGGAATGTGATGGAAGAGATATCAAACATCAGTTGCCAGTGTTACCGCAATGTAGTGTATGAAAATCCAGAATTCCTGGCCTACTTCCATGAAGCCACACCAGAGGCAGAACTTGGCTTCCTTAACATAGGTAGCCGCCCTGCAAGAAGGAAGAGCTCAAGAGGAATTGGACACCTTCGTGCAATTCCGTGGCTATTTGCATGGACACAAACAAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGAGCTTGTGAGAAAGGTCTAACTGAAGATCTAAAAGCCATGTACAAAGAATGGCCATTCTTCCAAAGTACCATAGACCTGATTGAGATGGTTTTGGGAAAAGCAGACATTCCTATAGCCAAACACTACGATGAAGTCCTTGTGTCAAAGGAGAGGCAAGAGCTTGGTGGTGAACTAAGAAGTGAGCTCATGACGGCTGAAAAGTTTGTACTAGTGATTAGTGGGCACGAGAAACTTCAGCAGAACAATAGGAGCTTGAGGAGGCTGATTGAGAATAGACTTCCCTTTCTCAATCCCTTGAACATGTTGCAGGTGGAGATCCTCAAGAGGTTAAGACGTGATGATGACAACATTAAAATCAGAGATGCTTTGCTTATCACCATAAATGGAATTGCTGCAGGGATGAAGAATACAGGTTGA 3111 0.4523 MTDITDDVAEEISFQSFDDDCRLLGNLLNDILQREVGTNLVDKIERIRVLAQSGCNMRQAGILNMAELLEKQLASELSKMTLEEAFTLARAFSHYLTLMGIAETHHRVRKGGNVAQIAKSCDDIFNQLVQGGVSPEELYDTVCKQEVEIVLTAHPTQINRRTLQFKHVRIAHLLDYNDRPDLSTEDREMVIEDLVREITSIWQTDELRRQKPTPVDEARAGFNIVDQSLWKAVPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVSLLSRWMAIDLYIREVDSLRFELSMNQCSDRLSRLAHDILEAKRDNPRENWNQSVNRSPALPTQLPARAHLPSIAENGESRHPRLDIPGPDHMQSNHKDGGAALSSTTSKNANSNIQSQGTSSANSSASSATTSSSFVQKKLYAEPQTGKSTFQKLLEPMLPQLPGIAPYRIVLGNVKDKLERSRRRLELLLEDVACDYEPSEYYETSDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAEALDAITEYLDMGTYSEWDEEKKLDFLTKELKGKRPLVPLSIEVPSDVKEVLDTFRIAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAAIGESGKACPGGTLRVVPLFETVKDLRGAGAVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELFKAQEDVVAACNDYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVEAKFGLPQIAVRQLEIYTTAVLLATLRPPIPPREEKWRNVMEEISNISCQCYRNVVYENPEFLAYFHEATPEAELGFLNIGSRPARRKSSRGIGHLRAIPWLFAWTQTRFVLPAWLGVGAGLKGACEKGLTEDLKAMYKEWPFFQSTIDLIEMVLGKADIPIAKHYDEVLVSKERQELGGELRSELMTAEKFVLVISGHEKLQQNNRSLRRLIENRLPFLNPLNMLQVEILKRLRRDDDNIKIRDALLITINGIAAGMKNTG 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00899 1036 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1036 IPR015813 GO:0003824
Vian3g00899 1036 Coils Coil 457 481 - -
Vian3g00899 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 289 369 - -
Vian3g00899 1036 Gene3D Phosphoenolpyruvate/pyruvate domain 386 530 - -
Vian3g00899 1036 MobiDBLite consensus disorder prediction 358 376 - -
Vian3g00899 1036 FunFam Phosphoenolpyruvate carboxylase 1 405 531 - -
Vian3g00899 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Vian3g00899 1036 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1036 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 MobiDBLite consensus disorder prediction 357 413 - -
Vian3g00899 1036 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 694 706 IPR033129 -
Vian3g00899 1036 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 MobiDBLite consensus disorder prediction 330 349 - -
Vian3g00899 1036 Pfam Phosphoenolpyruvate carboxylase 418 1036 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 Pfam Phosphoenolpyruvate carboxylase 19 331 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian3g00899 1036 MobiDBLite consensus disorder prediction 382 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00899 Vian-Chr3 9722331 9730094 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00899 3 9722331 9730094 Vian3g00899 3 9722331 9730094 ECH