Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00353 ATGGACAGAACATTGCTCTTCAAGTTACTCACTGTTGTTGTTCTTCTAGGATGTTCATCAGCTTCAGATCATTTGGTTAATGTCTCCAAGTTGGAGATGTTTGTGGATGAGCTTCCAGATATGCCCAGAATCCATAGTTATCGTGTTTTGAATGGTGTCCCAAAATCCAAACCTCTCAAGATTGGGATGTTCAAGAAGAAATGGAAATTTCACAGGGATCTTCCTCCAACAACAGTGTATGCTTTTGGAAAAACCAAGCACACAGCAACGGTTCCCGGTCCAACTATCGAAGCCCTTCACGGGGTTGATACGCACGTGAGGTGGCAAAATCACCTCCCTTCAAAACACATACTTCCGTGGGACCCAACAATCCCTACAGCGATTACCAACACCACACGTGGCATCCCCACAGTGGTCCACCTCCACGGTGGCATCCACGCGCCCGAGAGCGACGGAAGCGCGAATGCATGGTTCACTTCTAAGTTCAACGAAAGGGGACCTACGTGGAGCAGGAAAACTTATCACTATCCAAATAATCAGCACCCGGGGAATCTATGGTACCACGACCATGCCATGGGGTTGACCCGAGTCAACCTTCTGGCTGGCTTACTTGGCAGTTACATCATCCGCGATCCCGTCGTGGAGGAGCCGTTGGGGTTACCCACGGGTGACGAATTCGATCGACCGTTGGTCGTCTTCGATCGTAGCTTCCGCACCGACGGTTCCATCTATATGAGTTCCATCGGTAACAACCCCGATATACACCCTCAGTGGCAGCCAGAGTATTTCGGCGACGCCATCATTGTCAACGGCAAAGCGTGGCCGCGCCTCACAGTACGACGTCGTAAGTACCGATTCCGCATAATCAACGCCAGCAACGCCAGGTTCTTCAGATTTTTCTTCTCCAACGGCTTGAGATTCACGCACGTGGCGTCGGATTCGGCCTACATAGAAAAACCCGTGACGACAAACGAGACTCTGGTGGGGCCATCTGAGATCACAGACATCGTCGTTGACTTCTCTCAATCTAAGACTAACGTCGCTATCTTAGCTAACGATGCAAACTATCCTTACCCTTCTGGTGACCCCGTTAACCAGGCTAACGGCAAGGTCATGAAGTTTATCATTCTACCCGATCAAGAAGTTGACACGTCACGGCTTCCTCGACGATTGGTGGAATACCCCGTCGTGGATTTATCCAGTGTGACGCACACACGGTACGTTGCCATGTACGAGTACGCGAGCAAAATCGATGAGCCAACCCACCTGTATCTAAATGCAAAACCGTTCGATGCACCGGTAACGGAAACCCCGAGGGTGGGTTCCACAGAGGTGTGGTATGTGATAAACTTGACGGAGGATAATCACCCGCTGCACATTCATTTGGGTTTGTTGAAGGTGTTTGATCAGACGGCGCTGGTGGAGCTTGAAGAGTTGAAGGAATGCATGAAAAAAAAGAACGACGCAGTGAAGTGCAACCTGAAGAAGCACGCACGTGGGAAGAAAGTAGTGGTGGGAGATCACGAGAAAGGGTGGAAGAATGTGTTCAAGATGATACCTGGGCATGTAACGAAGATTGCAGTGAGGTTTTCTTACCTACACACCAACGCATCCTATTCCTTTGATGCAACCGCAGAACCTGGCTACGTCTACCATTGCCATGTATTGGATCATGAAGACAATGCTATGATGAGACCCTTGAAGCTCGTCAACTGA 1716 0.4971 MDRTLLFKLLTVVVLLGCSSASDHLVNVSKLEMFVDELPDMPRIHSYRVLNGVPKSKPLKIGMFKKKWKFHRDLPPTTVYAFGKTKHTATVPGPTIEALHGVDTHVRWQNHLPSKHILPWDPTIPTAITNTTRGIPTVVHLHGGIHAPESDGSANAWFTSKFNERGPTWSRKTYHYPNNQHPGNLWYHDHAMGLTRVNLLAGLLGSYIIRDPVVEEPLGLPTGDEFDRPLVVFDRSFRTDGSIYMSSIGNNPDIHPQWQPEYFGDAIIVNGKAWPRLTVRRRKYRFRIINASNARFFRFFFSNGLRFTHVASDSAYIEKPVTTNETLVGPSEITDIVVDFSQSKTNVAILANDANYPYPSGDPVNQANGKVMKFIILPDQEVDTSRLPRRLVEYPVVDLSSVTHTRYVAMYEYASKIDEPTHLYLNAKPFDAPVTETPRVGSTEVWYVINLTEDNHPLHIHLGLLKVFDQTALVELEELKECMKKKNDAVKCNLKKHARGKKVVVGDHEKGWKNVFKMIPGHVTKIAVRFSYLHTNASYSFDATAEPGYVYHCHVLDHEDNAMMRPLKLVN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00353 571 SUPERFAMILY Cupredoxins 407 567 IPR008972 -
Vian3g00353 571 CDD CuRO_2_CotA_like 226 376 - -
Vian3g00353 571 Pfam Multicopper oxidase 127 212 IPR011707 GO:0005507
Vian3g00353 571 CDD CuRO_3_CotA_like 403 569 - -
Vian3g00353 571 SUPERFAMILY Cupredoxins 33 212 IPR008972 -
Vian3g00353 571 Pfam Multicopper oxidase 424 567 IPR011706 GO:0005507|GO:0016491
Vian3g00353 571 Coils Coil 473 493 - -
Vian3g00353 571 Pfam Multicopper oxidase 265 356 IPR001117 -
Vian3g00353 571 Gene3D - 29 209 IPR008972 -
Vian3g00353 571 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 12 570 IPR045087 -
Vian3g00353 571 FunFam Multi-copper oxidase type I family protein 213 392 - -
Vian3g00353 571 FunFam Spore coat protein A 30 210 - -
Vian3g00353 571 FunFam Spore coat protein A 393 571 - -
Vian3g00353 571 Gene3D - 213 392 IPR008972 -
Vian3g00353 571 CDD CuRO_1_BOD_CotA_like 61 213 - -
Vian3g00353 571 ProSitePatterns Multicopper oxidases signature 2. 552 563 IPR002355 GO:0005507
Vian3g00353 571 Gene3D - 393 571 IPR008972 -
Vian3g00353 571 SUPERFAMILY Cupredoxins 224 347 IPR008972 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00353 3 3409318 3412803 Vian3g00353 3 3409318 3412803 ECH