Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00351 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTTAACATTCACTGTGATGGGTGTAAGCACAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAAGTAACGGTTTCAGGTAGTGTGGATTCTGCAACCTTGATCAAGAAGCTGGTGAGAGCTGGTAAATATGCCGAGCTCTGGTCTCAGAAATCAAACCAGAACCAAAAGCAGAAGAACAACAACGCGAAGGATGACAAGAACAAAGGACAGAAGCAAGGCCTTCCCAAGGGGCTTGATGCCTTTAAAAACCAGCAAAAGTTTCCTGCTTTTAGTTCTGAAGAGGATGAATACTACTCTGAATACGAAGACGATGATGAGGACGAAGATGAAGAAATGCGGTTTCTAAGGGAGAAAGCCCATCATCTGCAGATGCTCAAGCAGCAAACAGCTAATGCAAATGTGAGGAAAAGTATGGGGGGCATGGGAGCAGGTGCCATCAATGGTAAGATGAACAATGGTGGTGGCAATGGTGGTGGTGGTGGTGGTGGTGGCAAGAAAGGAGGCCCGAATCCGAATATGGGAATGAAGGAGAGTCCGAATGTGGGGCTTGATCAGAAAACAATGGCAGCCTTAAAATTGAACGGTGGTCATGTGGGTGGTGAAGGCCTCGGCCTCAATCTTGGTGAAGCGAAAAGGGCCAATGACATTGGGGCCATGATGAACATGGCTGGTTTTAACGGTAACGGTGGCAATGTCACCAGTGCCACTGTTCTAGGAGCCAATAATTCTAGTGGTATGGGAGGTTTTCCTGTTCAGTCCAATAACATGATTCCAGGGTCCTCTGCAGGTTTTTCAAATGGAGGTATTGGTGCTGGGCAATACCCATCTTCTCTGCTAATGAACATGAATGGGTTCAACAACCATCCATCCCCATCGCCATTGATGATGAACATGAACATGAACATGCAGGCTAGACAAGCCATGCAACAACAGCCCCAGATGATGTATCACAGGTCTCCCTTGATTCCCCCCAACACTGGCTATTACTACAACCATAGCAATAGCTACAGCCCTGCACAATACGCCTATTCCTATGGGTTGCCTAGTTACCCTGGGGGTGATGATCACTCTGCGACTCACATGTTCAGTGATGACAACACCAGCAGCAGTTGTTCAATAATGTAA 1215 0.4601 MTKEEDFKLLKIQTCVLKVNIHCDGCKHKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKSNQNQKQKNNNAKDDKNKGQKQGLPKGLDAFKNQQKFPAFSSEEDEYYSEYEDDDEDEDEEMRFLREKAHHLQMLKQQTANANVRKSMGGMGAGAINGKMNNGGGNGGGGGGGGKKGGPNPNMGMKESPNVGLDQKTMAALKLNGGHVGGEGLGLNLGEAKRANDIGAMMNMAGFNGNGGNVTSATVLGANNSSGMGGFPVQSNNMIPGSSAGFSNGGIGAGQYPSSLLMNMNGFNNHPSPSPLMMNMNMNMQARQAMQQQPQMMYHRSPLIPPNTGYYYNHSNSYSPAQYAYSYGLPSYPGGDDHSATHMFSDDNTSSSCSIM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00351 404 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 404 - -
Vian3g00351 404 FunFam Copper transport protein ATOX1 11 80 - -
Vian3g00351 404 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Vian3g00351 404 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Vian3g00351 404 Gene3D - 12 84 - -
Vian3g00351 404 CDD HMA 16 75 IPR006121 GO:0046872
Vian3g00351 404 Coils Coil 82 102 - -
Vian3g00351 404 MobiDBLite consensus disorder prediction 125 139 - -
Vian3g00351 404 Coils Coil 128 148 - -
Vian3g00351 404 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Vian3g00351 404 MobiDBLite consensus disorder prediction 79 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00351 Vian-Chr3 3391452 3393370 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00351 3 3391452 3393370 Vian3g00351 3 3391452 3393370 ECH