Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00346 ATGGGAGTTGACAGGAAATGGCTTTTCACTCTATTCAGTGCAGCATTGCTATCTCTCATGGTTCTGTTGATGTCCTCTTTCTCTGCTTTTAGTTCTCCTAAGGCTTTCCCTTCCCTTGTTCAGCATGGCTCTCACTACCCTCCAGCTTTTGCATACTTTATCTCTGGTGGACACCAAGACAAGGACCGGATCTTGCGTTTGTTGTTGGCAGTTTACCATCCTAGGAATAGGTACCTCCTCCATCTTGGGAAGGATGCCAGGGACGAGGAGAGAAAAGCCCTGGTTGCCGCCACGAGGGCGGTGCCGGCCATTCGTGCTTTCGGGAACGTTGATGTGGTTGGAAAGGCTGATTATGTCACCTACTTGGGGTCCTCCAATGTGGCCATCACTCTCCGGGCTGCAGCCATTATGCTCAAATTGGATAGTGGATGGAATTGGTTCATCACTTTGAGTGCACGGGATTATCCTCTCATCACACAGGATGATCTTTCCCACGTTTTCTCTTCCGTTAGGAGAGACCTGAATTTCATTGAGCACACTGGTGACCTTGGATGGAAAGAGAGCGATAGATTCCAGCCTATTGTAGTTGACCCGGGGCAAATCTTTTATCTCATGCCTTCTGTGCAGCACAATACATGTCTTACAGGGTTTTCGTTCCCCCCTATATATGTTGAATGCTTTTCTTGGCATGCAGGTTCGCCATGGGTAATCTTGAGCAGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGAACCCTACTGATGTACTTTACAAATGTGAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCATTTGCAATGCGCCAGAGTTCAAGAACACAACAGTAAATGGGAACTTACGATATATAGTCTGGGACGATCCTCCAAAGATGGAACCACTCTTCCTTAATGCTTCCGCTTACAATCAGATGGTAGAAAGTGGAGCTGCTTTTGCAAGACAGTTTCAATTTAATAATCCTGTGTTGGACATGATTGATGAGAAGATTCTCCATCGTGGTAGCCATCGAGCTACTCCAGGAGTGTGGTGCACTGGGCGGAGGAGCTGGTGGGCGGATCCGTGCTCCCAATGGGGTGATGTCAATATTGTAAAACCAGGTCCTCAGGCTAAGAAGCTTCAAGGGTCCGTTTCTAACCTTCTTGATGGCTGGAACTCACAGACCAATCAATGTCGGTGA 1209 0.4739 MGVDRKWLFTLFSAALLSLMVLLMSSFSAFSSPKAFPSLVQHGSHYPPAFAYFISGGHQDKDRILRLLLAVYHPRNRYLLHLGKDARDEERKALVAATRAVPAIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVRRDLNFIEHTGDLGWKESDRFQPIVVDPGQIFYLMPSVQHNTCLTGFSFPPIYVECFSWHAGSPWVILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGNLRYIVWDDPPKMEPLFLNASAYNQMVESGAAFARQFQFNNPVLDMIDEKILHRGSHRATPGVWCTGRRSWWADPCSQWGDVNIVKPGPQAKKLQGSVSNLLDGWNSQTNQCR 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00346 402 PANTHER GLYCOSYLTRANSFERASE 4 401 IPR044610 GO:0015020
Vian3g00346 402 Pfam Core-2/I-Branching enzyme 50 305 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00346 Vian-Chr3 3340651 3344845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00346 1 402 Glycosyltransferase AT1G71070 63.433 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00346 3 3340651 3344845 Vian3g00346 3 3340651 3344845 ECH