Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00323 ATGGAAGAGGGTCTCTTGGAGAAGAAGGGAGAGGTGGAAGATGGTGGTTCAGGCGTAATAAGATGGAATGTGTTTGGTGAAGAGGTTAAAAGGGTTGCTTATTTAGCAGGTCCTATGGTTGCTGTAACTCTGTCACAGTATTTTCTACAAATAATATCAATGATGATGGTTGGTCGCTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTCTCTGTAATGTCTCTGGCCTCAGTGTCATTGTAGTTTGTCTTCCTCTTTCTTTCTTGTGGATGAACATGGGAAACCTCCTCGTTTTACTTGGCCAAGATCGTTTGGTTTCACTAGAAGCTGGAAAATTTGCTCTGTGCATGATCCCTGCTCTCTTTGCTTATGCAGCACTTCAGTCTGTGGTTCGATTCTTTTTGATGCAAAGTTTGATGAGTCCTCTTGTCATAAGTTCCTTCATTACTCTTTGCTTCCATGTGGCATTCAGTTGGTTTATGGTGTTTAAATCGGGACTTGGTAACTTAGGAGCAGCATTTTCTATTGGTACTTCATATTGGCTGAATGTGACTATACTTGGATTATATATGAAATTCTCTTCTCATTGTGAAAAGACTCGAGCCCCAATTTCAATGGAATTATTCCATGGGATTGGAGAATTCATTCGCTATGCCATTCCTTCAGCTGGAATGATTTGCCTTGAATGGTGGTCGCTTGAAATACTAATTTTGCTTTCTGGTCTTCTACCAAATGCAAAGCTAGAAACATCAGTCTTATCCGTATGCGCAACAATCTACACAATCCCAGAATCAATTGGCGCAGCAGCAAGCGCTAGAGTTTCGAATGAATTAGGTGCTGCAAGTCCACAATCAGCAAAAGTATCTGCTTATGCTTCCATGATACTGGCAGCTACCCAGGCCATTGTGGTGGGCTCGATAATTTTTTCTTGCAGGCAGATTTTGGGTTATGTATTCAGCAATGAGCAGGACGTGGTGGATTATGTCTCAGAATTGGCTCCTCTCTTAAGTCTCTCTGTTATGCTGGACTGCTTGCACGGTACCCTTTCAGGTATTGCGAGAGGATGTGGGTGGCAGCACTTAGGAGCATACGTAAACCTTGGAGCCTACTATGTTTTTGGAATTCCAATTGCTGCTATATTGGGTTTCTGGGTCCAATTTAGAGGAAAAGGGCTGTGGATTGGAATACTGATTGGTGCCTTTTGTCAAACAGCTATGCTACTTCTCATAACAATGTGTACAAACTGGAAAAAACAGGCAATTGAAGCAAGGGAAAACATTTTTCAGAGAAGTTTCTCTGTAGAAGATGGATTAGCTTAA 1329 0.4221 MEEGLLEKKGEVEDGGSGVIRWNVFGEEVKRVAYLAGPMVAVTLSQYFLQIISMMMVGRLGKLALSSTAIAISLCNVSGLSVIVVCLPLSFLWMNMGNLLVLLGQDRLVSLEAGKFALCMIPALFAYAALQSVVRFFLMQSLMSPLVISSFITLCFHVAFSWFMVFKSGLGNLGAAFSIGTSYWLNVTILGLYMKFSSHCEKTRAPISMELFHGIGEFIRYAIPSAGMICLEWWSLEILILLSGLLPNAKLETSVLSVCATIYTIPESIGAAASARVSNELGAASPQSAKVSAYASMILAATQAIVVGSIIFSCRQILGYVFSNEQDVVDYVSELAPLLSLSVMLDCLHGTLSGIARGCGWQHLGAYVNLGAYYVFGIPIAAILGFWVQFRGKGLWIGILIGAFCQTAMLLLITMCTNWKKQAIEARENIFQRSFSVEDGLA 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00323 442 NCBIfam MATE family efflux transporter 82 396 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian3g00323 442 CDD MATE_eukaryotic 28 423 IPR045069 GO:0042910|GO:1990961
Vian3g00323 442 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 82 - -
Vian3g00323 442 Pfam MatE 224 382 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00323 Vian-Chr3 3117396 3119770 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00323 3 3117396 3119770 Vian3g00323 3 3117396 3119770 ECH