Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00321 ATGGAAAAGGGTCTGTTGGAGAAGGAGAGAGAGAGCGATTCAGGCATAATAAGATGGAATGTGTTTGGTGAAGAGGTGAAAAGGGTCGGTTATTTGGCAGGTCCTATGGTTACCGTGACTTTGTCACAGTATTTTCTACAAATGATATCATTGATGATGGTTGGTCACTTGGGTAAGCTTGCTCTCTCCAGCACAGCCATTGCCATCTCTATCTGTGCTGTATCTGGCTTCAGTGTCATCCTGCTCATTATACTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTTGCTTTGTGCATGATCCCTGCTCTCTTTGCTTATGCAGCACTTCAGACTTTGGTTCGATTCTTTTTGATGCAAAGCCTGATCAGTCCCCTTTTCATAAGTTCCTCCATTACACTTTTCTTCCATGTCGCTTTCAGTTGGTTAATGGTTTTTAAATCTGGACTCGGTAACTTAGGAGCAGCACTTTCTATCAGCACTTCATACTGGCTGAATGTGATTTTACTTGGATTGTATATGAAATTCTCTACTCAATGTGAAAAGACTCGAGTCCCAATTTCAATGGAACTATTCCATGGGATTGGAGAATTCATCCGCTATGCCATTCCTTCGGCTGGAATGATATGCCTTGAATGGTGGTCGTTTGAGCTAGTAATCTTGCTTTCTGGTCTTCTACCAAATCCAGAACTAGAAACTTCAGTCTTATCCATATGTTTAAACATCACCACAGCAATCTACACTATCCCAGAATCAATTGGCTCAGCTGCAAGCACTAGAATTTCAAATGCATTAGGAGCTGGAAGTCCACAATCAGCACGAGTATGTGTTTATGCTGCTATGGCTCTTGCAACTTCCGAGGCCATTCTGGTGAGCTCAATCATTTTTTCTTGCAGGCAGATTTTGGGTTATGTATTTAGCAATGAACAGGACGTGGCAGATTATGTCACAAATATAGCTCCTCTCTTGAGTCTTTCTATTATACTGGATTCCTTGCACGCTACCCTATCAGGTATTGCTAGAGGATGTGGATGGCAGCACTTAGGAGCATATGTAAACCTTGGAGCCTATTATGTTTTTGGAATTCCAACTGCTGCTATATTGGGCTTCTGGTTAAAATTAGGAGGAAAAGGGTTGTGGATAGGAATAATCACTGGCGCATTCTGTCAAACAGTTATGTTATCTCTCATAACAACATGTACAAACTGGGAAGAACAGGCAATTAAAGCAAGGGAAAGCGTATTTCAGGGAAGTTTTTCAGTAGAAGATGCGTTGGTTTAA 1287 0.4149 MEKGLLEKERESDSGIIRWNVFGEEVKRVGYLAGPMVTVTLSQYFLQMISLMMVGHLGKLALSSTAIAISICAVSGFSVILLIILGQDPLISQEAGKFALCMIPALFAYAALQTLVRFFLMQSLISPLFISSSITLFFHVAFSWLMVFKSGLGNLGAALSISTSYWLNVILLGLYMKFSTQCEKTRVPISMELFHGIGEFIRYAIPSAGMICLEWWSFELVILLSGLLPNPELETSVLSICLNITTAIYTIPESIGSAASTRISNALGAGSPQSARVCVYAAMALATSEAILVSSIIFSCRQILGYVFSNEQDVADYVTNIAPLLSLSIILDSLHATLSGIARGCGWQHLGAYVNLGAYYVFGIPTAAILGFWLKLGGKGLWIGIITGAFCQTVMLSLITTCTNWEEQAIKARESVFQGSFSVEDALV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00321 428 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 80 - -
Vian3g00321 428 CDD MATE_eukaryotic 25 411 IPR045069 GO:0042910|GO:1990961
Vian3g00321 428 Pfam MatE 35 97 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian3g00321 428 Pfam MatE 206 368 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian3g00321 428 NCBIfam MATE family efflux transporter 79 382 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00321 Vian-Chr3 3107998 3110382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00321 3 3107998 3110382 Vian3g00321 3 3107998 3110382 ECH