Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00318 ATGTTACGTCTCACCATGGGATTGGTAACCACCACTGTTCCCGCGAACGTCGTTCCTCAATTCGGGTCAGTCCGAACATCTATTCGGGTCGGAAACCCATCCGGGTTGAACTTCCCTCACTCACTGTCACAGAAGAGGAATAGGAGCTATGTTTGCTTGGCTGTGGATGACGACCTCAGACAGGAGCAGCAGGACTCGAGTACAACCGGTATTGGGTTGGGCTCCGCCCTTGAAGAAAGGCCCGGAAACACAGATCTTTTTGAGAGTACATCAGAAGAAATGCAGGGAAATTTTGAACAAGATGGTGAACGAAGTGCTATCTATGATTTTCTTTATCCTAATAAAGATCTTCTTCCTGATGATAAAGAAATGAGTGTATTTGATCATCTTGAAGAGCTGCGGCAGAGAATCTTTGTATCAGTTTTAGCTGTTGGAGCTAGCATTTTGGGATGCTTTACATTTTCAAAAGAATTGATAATGATTCTTGAAGCTCCTGTTAAATCACAGGGTGTAAGATTTCTTCAGCTGGCTCCTGGTGAATTTTTCTTTACAACTTTAAAGGTGTCTGGGTACTGTGGCCTTCTTTTGGGAAGCCCCGTCATCCTCTATGAAATCATAGCCTTTATACTTCCAGGACTTACAAAAGCCGAAAGAAGATTTTTAGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTATGCTGGAATAACTTTCTCCTACTTAGTTCTGACACCTGCCGCTTTAAATTTCTTTGTTAACTACGCTGAAGGCGCTGTTGAATCAATTTGGTCCATTGATCAGTACTTTGAATTTGTTCTTGTGCTTATGTTCAGTACAGGCTTATCTTTCCAGGTACCTGTCATACAATTTCTACTGGGACAACTTGGACTGGTATCCGGAGACCAGATGCTATCAATTTGGAGGTATGTTGTGGTTGGTGCAGTAGTGGCAGCCGCTATAGTTACGCCATCTACCGATCCTCTCACTCAAGTTCTTCTAGCAGCACCTTTATTGGGTCTTTACCTTGGTGGGGCATGGATGGTCAAGCTGACTGGACGATGA 1062 0.436 MLRLTMGLVTTTVPANVVPQFGSVRTSIRVGNPSGLNFPHSLSQKRNRSYVCLAVDDDLRQEQQDSSTTGIGLGSALEERPGNTDLFESTSEEMQGNFEQDGERSAIYDFLYPNKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGASILGCFTFSKELIMILEAPVKSQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFILPGLTKAERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESIWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLTGR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00318 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 125 152 IPR002033 GO:0016020
Vian3g00318 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 199 217 IPR002033 GO:0016020
Vian3g00318 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 217 243 IPR002033 GO:0016020
Vian3g00318 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 268 296 IPR002033 GO:0016020
Vian3g00318 353 ProSitePatterns TatC family signature. 268 287 IPR019820 -
Vian3g00318 353 Pfam Sec-independent protein translocase protein (TatC) 128 336 IPR002033 GO:0016020
Vian3g00318 353 Hamap Sec-independent protein translocase protein TatC [tatC]. 121 353 IPR002033 GO:0016020
Vian3g00318 353 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 105 353 IPR002033 GO:0016020
Vian3g00318 353 NCBIfam twin-arginine translocase subunit TatC 127 341 IPR002033 GO:0016020
Vian3g00318 353 MobiDBLite consensus disorder prediction 61 83 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00318 3 3095560 3099541 Vian3g00318 3 3095560 3099541 ECH