Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00317 ATGGAACCAGAGAATCACAAAACGAAGGCAGTGAACGTGCTTCGAAGCAGAATCTGCGACCCCAAATTCATATTCAACAACGATTATCCAGACAGCAACTACAGCAAACTGAAATTCATGATATCGAGTTCGGTGACGGAAGCGTGCAACAATTCTATTCTGCTACTCGGTCCGCGCGGCTCCGGAAAGAACGCGGTTTTGGAAGTTGTCATTCAAGATTTGCTGCAAGAGTATCCAGACTCGATTTCAGTGATACGGCTGAATGGCCTTTTACATAGCGACGACATCTCTGCATTCAAGGAAATAGCTAGGCAGTTGTGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAGTTTATGGTTGCCATTCTAAAGGAATGTGGATTAGCACATAAAACAGTGATATTTGTTCTGGAAGAGTTTGACTTGTTTGCTCAGGGTAAACAGCGGTTACTTTATAGTTTGTTAGATGCAATGCAATCAATTACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGTTTGGATGCAGATCAACTATTGGAGAAAAGAGTACGATCTCGGTTTTCCCATAGAAAGCTGTTGTTCTTACCACCTTCAATGGAAGATTCACAGAAGTTACTAATGCACATGCTGACATTACCAATCGATTCAAGCTTTCCGCATGATTATGCTACTGAGTTTAACACGAAGGTCAAAAATATTATAGAAGATAGAAAGTTCAAAGAAACCCTACAAAAGTATTTAAATGTTGATTCCTCTGTCAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATAGATTTGCAGACTGGGTTCTTGTCTCAGGAGGGCTTTGAAATTGCATTTTCAAGCATCCAAAGACAACCGAAACTAGAGTGTTTAAGAACAGATTGCTCCAATTTAGAACTTCATATTCTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGAAAAGTTTATGCAATTTCAATTCTGTAATGAAAGAGTATAAAACTATGCATGATTCCTTCCGAACTTCTGAATATTATTCGAGAAGTGTCTGCTTACGGGCATTTGAACACCTTCTACATCTTGAGATGATATGTTTCACAGACAATAGAGGACAGAATTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCTGAACTACATCAGGGACTGAGATCGTATAATTCATGCCCTGCTTACCTTATAAAGTTAATGGATCGTGAAGGCTAA 1257 0.3946 MEPENHKTKAVNVLRSRICDPKFIFNNDYPDSNYSKLKFMISSSVTEACNNSILLLGPRGSGKNAVLEVVIQDLLQEYPDSISVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAILKECGLAHKTVIFVLEEFDLFAQGKQRLLYSLLDAMQSITSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQKLLMHMLTLPIDSSFPHDYATEFNTKVKNIIEDRKFKETLQKYLNVDSSVKHLLRFLFCAVSHIDLQTGFLSQEGFEIAFSSIQRQPKLECLRTDCSNLELHILVCMKRLEVKEKSLCNFNSVMKEYKTMHDSFRTSEYYSRSVCLRAFEHLLHLEMICFTDNRGQNLSVEFRPVKLLISSAELHQGLRSYNSCPAYLIKLMDREG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00317 418 FunFam Origin of replication complex subunit 4 31 205 - -
Vian3g00317 418 PIRSF ORC4 3 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Vian3g00317 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 214 398 IPR032705 -
Vian3g00317 418 Pfam AAA ATPase domain 35 168 IPR041664 -
Vian3g00317 418 Gene3D - 31 205 IPR027417 -
Vian3g00317 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 8 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Vian3g00317 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 254 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00317 1 415 Core DNA Replication Machinery Family AT2G01120 63.443 0.0 552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00317 3 3087439 3092130 Vian3g00317 3 3087439 3092130 ECH