Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00313 ATGGCTATGGCTTCTGCAAAGCTCAATACTTTGTCTTCACAGTGGATCGCCCACAGCACCTTTTCTCCACGCCGGGGATCTTCTCCTCGCCGGGTCTCTCTCCCGATCCGCGCCTCTTCTTACCAACACGAACTCGTCCAAACTGCTAAATCTATTGCAACTCCTGGGCGTGGAATTCTTGCAATTGATGAATCAAATGCAACATGCGGGAAGCGTTTAGCATCCATTGGTTTGGACAATACTGAGGTGAATCGCCAGGCTTACAGGCAACTTCTGCTTACCACACCTGGCCTTGGAGAGTATATTTCTGGTGCCATTCTTTTTGAAGAAACCCTTTACCAGTCAACCACTGATGGAAAGAAATTTGTGGATTGCCTTCGTGATCAGAACATTGTTCCTGGCATCAAAGTTGATAAGGGTCTGGTCCCCCTGCCGGGTTCAAACAATGAATCATGGTGCCAAGGGTTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGAGGACAGTTGTTAGCATTCCATGTGGTCCTTCTGCATTAGCTGTTAAGGAAGCAGCATGGGGACTTGCACGTTATGCCGCTATCTCTCAGGACAATGGCCTTGTGCCAATTGTGGAGCCTGAAATTCTTCTGGACGGAGACCACTCAATTGAAAGGACGTTGGAAGTTGCCGAGAAAGTCTGGTCTGAAGTCTTCTTCTACTTGGCTGAAAACAATGTCATGTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCTGGACATAAGGAAAAGGCTTCTCCGGAAACCGTTGCCAAATATACTCTAACCTTGCTTAGAAGAAGAGTTCCTCCAGCAGTACCCGGAATCATGTTTTTGTCGGGTGGACAATCTGAAGTGGAAGCGACACTTAATCTAAATGCAATGAACCAAAGCCCCAACCCATGGCATGTTTCTTTCTCGTATGCTCGAGCTCTTCAGAACACCGTGCTAAAGACGTGGAAAGGACACCCTGAGAATGTGGAAGCTGCTCAAAAGTCTCTTTTGGTGCGCGCAAAAGCAAACTCCTTGGCTCAACTTGGAAGATATTCTGCGGAGGGTGAGAGTGAAGAGGCAAAGAAGGGAATGTTTGTCAAGGGCTATGTCTACTAA 1167 0.4756 MAMASAKLNTLSSQWIAHSTFSPRRGSSPRRVSLPIRASSYQHELVQTAKSIATPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHSIERTLEVAEKVWSEVFFYLAENNVMFEGILLKPSMVTPGAGHKEKASPETVAKYTLTLLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWKGHPENVEAAQKSLLVRAKANSLAQLGRYSAEGESEEAKKGMFVKGYVY 388
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00313 388 CDD FBP_aldolase_I_a 44 368 - -
Vian3g00313 388 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 249 259 IPR029768 -
Vian3g00313 388 Gene3D Aldolase class I 30 387 IPR013785 -
Vian3g00313 388 FunFam Fructose-bisphosphate aldolase 27 387 - -
Vian3g00313 388 SUPERFAMILY Aldolase 35 388 - -
Vian3g00313 388 Pfam Fructose-bisphosphate aldolase class-I 44 388 IPR000741 GO:0004332|GO:0006096
Vian3g00313 388 NCBIfam fructose-bisphosphate aldolase class I 44 364 - -
Vian3g00313 388 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 39 388 IPR000741 GO:0004332|GO:0006096
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian3g00313 Vian-Chr3 3016315 3018884 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00313 39 388 Miscellaneous Gene Families AT3G52930 54.802 1.04e-131 380
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00313 3 3016315 3018884 Vian3g00313 3 3016315 3018884 ECH