LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian3g00311	ATGTCTCAGAACAAGAATGTTTCTTTGGAGCGAAGTGCTCCACAACAACCTCGTCCTTCCAATGTATACGTGGGAGTTGGAGGTTCAGACAGCCTCTGCATAAGCCCCAAGCGAGATCACAAGTCTGAAAACTACGAGGACCTTCAATTAGAGTTCAACCCTCTTGTGTTTAGCTCTTTGGAGCAGTATTTGCCTCCCCACATGCTCAACCTCACACGCGAGGTTAAGGTTCAGTACATGAGGAACATTTTGCTTCGATATTTGCCCGAGAGTGAGCGCATTCGGGTGGATCATTTTGAAAGATGGGTCCATGCTACCAAGTTCAGAATCATGCGACCTAATATAATGAATCAATATGGTGCCGTACTTGATGATTTTGGCTTGGAAGCCATGCTTGACAGATTGATGAGTGATTTCATACGTCCTATGTCCCGAGGCTTCCATGTCGACGATTCAGAAGTCTCCTTAAATATTTGCTTGGGGGACAAATTTTCTGGTGGAGAACTGTTCTTCCGGGGTGTTCGATGTGATGAACATGTAAATTCAGATATCCAACCAGTGGAGAACTTCGATTACTACCATGTTCCAGGACATGCAATTCTTCATCCAGGTCGTCATCGGCATGGTGCTAGACCTACAACATCTGGGAATCGGATAAACTTAATTCTCTGGTGTAGAAGCGTGATGTCGCAGAACCAGCACAGTGTCCCACAGCAACCTCGACCCTCCGGTGGACATGTGACAGCAAGAGTGGTAAATTTGAATTCCGATAGGCTCTGCGTAAGCCCCAAGCGAGATCACAAGTCTGAAAACTATGAGGACCTTCAACTGGATTTCAATCCTCACGTCTTCGGCTCACTGGAGCAGTATTTGCCTCCTCACGTCCTCAACCTGTCACGTGAGGTTAAGGTTCGGTATATGAGGAACATTCTGCTTCGCTATTTCCCCGAGAATGACCGCAATCGGGAGATCTTCAATTATTCCCATGTTCCAGGACACGCAATTCTTCATCCTGGCCGTCAACGGCATGGTGCAAGACCTACAACATCTGGGAACAGGATGAATTTAATCATCTGGTGTAGAAGGTTAACGAGAACGTTGACGTCTATACCTTCCCCTTCTTGTAAAAGTTCTTTCAAAGAAAATGACTTCCGAAGAAGCTGTAAGAAACATACCTTTCCTTACTTGGAAGAGTTCTCCAATGGAAGGACTCCAAGAACCTACCTCAAAGCTTCGCGTCTTGGAAAGTGGAGGCGTTTCCAGAATGATTGTAGTGGCTGGTGTGGAGAATGCAAACGTAAGAAGAATGAAGAGGCCTCTAAGCATGCAGATGCTAATCGTTCTTGTACTGCACAGTTGATTTGGTGCATTCCTCATTGA	1380	0.4587	MSQNKNVSLERSAPQQPRPSNVYVGVGGSDSLCISPKRDHKSENYEDLQLEFNPLVFSSLEQYLPPHMLNLTREVKVQYMRNILLRYLPESERIRVDHFERWVHATKFRIMRPNIMNQYGAVLDDFGLEAMLDRLMSDFIRPMSRGFHVDDSEVSLNICLGDKFSGGELFFRGVRCDEHVNSDIQPVENFDYYHVPGHAILHPGRHRHGARPTTSGNRINLILWCRSVMSQNQHSVPQQPRPSGGHVTARVVNLNSDRLCVSPKRDHKSENYEDLQLDFNPHVFGSLEQYLPPHVLNLSREVKVRYMRNILLRYFPENDRNREIFNYSHVPGHAILHPGRQRHGARPTTSGNRMNLIIWCRRLTRTLTSIPSPSCKSSFKENDFRRSCKKHTFPYLEEFSNGRTPRTYLKASRLGKWRRFQNDCSGWCGECKRKKNEEASKHADANRSCTAQLIWCIPH	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian3g00311	459	MobiDBLite	consensus disorder prediction	1	21	-	-
	Vian3g00311	459	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	109	227	IPR005123	-
	Vian3g00311	459	SMART	p4hc	67	226	IPR006620	GO:0005506\|GO:0016705\|GO:0031418
	Vian3g00311	459	MobiDBLite	consensus disorder prediction	1	19	-	-
	Vian3g00311	459	Gene3D	q2cbj1_9rhob like domain	61	227	-	-
	Vian3g00311	459	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	95	146	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian3g00311	Vian-Chr3	2994193	3009076	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian3g00311	3	2994193	3009076	Vian3g00311	3	2994193	3009076	ECH