Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00302 ATGCCAGAAATTCAGTTGGGTATGCATACTATCAGATCACATGGAACTAGAGTGGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGATCATCGATGCTGTCTTGAATATAATAGAGCCATTTCACCGTTTCGTTGGGGAGGGGATGATGACTGACCTTAGATACCCATTGAAAGGCAATACTATTCCCTTTTGGGCCGTTCCGATAGTAGCCATATTGTTACCACTGGCCGTTTTTCTCGTTTATTATTTCATTCGAAAGGATGTCTATGACTTCCACCACGCTATATTGGGCCTTCTATTTTCTGTACTCATTACTGCGGTGATAACTGATGCTATCAAGGATGGTGTAGGACGGCCGAGGCCAGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAAGGGGTGTTTGATCCAGTAACAAGTGATGTTCGCTGTACTGGAGATAAGGGTGTTATTAAGGAAGGACACAAAAGTTTCCCCAGCGGACATACTTCCTGGTCCTTTGCTGGTCTTGTTTATCTTTCTTGGTATCTATCTGGTAAAATTAGGGTATTTGACCGCAGGGGCCATGTTGCAAAGCTCTGTCTCGTTTTCTTACCGGTCCTCGTGGCAGCTATGATTGGTGTCTCTCGTGTTGATGATTACTGGCATCATTGGCAAGATGTGTTTGCTGGAGGTCTTATAGGGACGACAATTGCTTCCTTTTGTTACTTACAATTCTATCCACCTCCTTACGATCTAGATGGTTGGGGACCTCACGCATACTTCCAGATGTTGGCTGAAACTCGTAATGGTTCTCAGCCCTCTACCGTGAATAATGAGATTCATCATGTGCAATCTTCTGAGCTTCAAGCTGTATCTGTGTATATTCCACCTCAACATGATGCTGATACACGAGTCAACAGCTGGGATTCAAGCCCCATGTTAGGAGCATCCCAAAATGTAAGAACACATTGA 969 0.4396 MPEIQLGMHTIRSHGTRVARIHMHDWLILLLLVIIDAVLNIIEPFHRFVGEGMMTDLRYPLKGNTIPFWAVPIVAILLPLAVFLVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKGVFDPVTSDVRCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKIRVFDRRGHVAKLCLVFLPVLVAAMIGVSRVDDYWHHWQDVFAGGLIGTTIASFCYLQFYPPPYDLDGWGPHAYFQMLAETRNGSQPSTVNNEIHHVQSSELQAVSVYIPPQHDADTRVNSWDSSPMLGASQNVRTH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00302 322 MobiDBLite consensus disorder prediction 303 322 - -
Vian3g00302 322 Pfam PAP2 superfamily 100 244 IPR000326 -
Vian3g00302 322 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 250 - -
Vian3g00302 322 CDD PAP2_containing_1_like 55 244 - -
Vian3g00302 322 PANTHER LIPID PHOSPHATE PHOSPHATASE 12 280 IPR043216 GO:0006644
Vian3g00302 322 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 249 IPR036938 -
Vian3g00302 322 FunFam Lipid phosphate phosphatase 2 20 252 - -
Vian3g00302 322 SMART acid_phosph_2 98 241 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00302 Vian-Chr3 2871440 2874016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00302 1 290 Lipid Metabolism Gene Families AT1G15080 76.207 2.92e-160 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00302 3 2871440 2874016 Vian3g00302 3 2871440 2874016 ECH