Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00301 ATGGCGTCGGCTTCACAGGGTTCCTCTTCTTTCCAAAGGTTTTGGGCGTCATTTCGGGGAGGGATGAGGCTGCCGGTTGATCCCTCGGCTCATACTATCAAGTCCCATGGAGCCGCACTTGCAAGAAATCACGTTCGTGATTGGCTTATTTTGTTGCTTCTTATAGTGATAGAGGTTGTCCTTTTTGTCATCAAACCATTTTATCGCTTTGTGGGAAGGGATATGATGGAAGACCTTAAATATCCTATGCAAGAAAACACGGTGCCAGTTTGGGCTGTTCCTTTATATGCGGTTCTGTTGCCAATGGCCGTTTTCCTTCTATTTTATATGCGCAGGAGAGATGTATACGATTTACACCACAGTGTTCTAGGCTTGTTATTTGCAGTTTTGATCACTGGAGTCTTAACCGATGCTATAAAAAATGCAGTTGGCCGGCCTCGGCCAGACTTCTTTTGGCGTTGCTTCCCCGATGGAGTGGAGAATTATGATAAATGGGGAGATGTGGTATGTCATGGCAAGGAGAGCGATATAAAAGAAGGACACAAAAGTTTCCCAAGCGGCCATACGTCATGGTCCTTTGCCGGTCTAGGTTTTCTCTCTCTGTACCTATCGGGAAAGATTAAAGCTTTTGATCAAAAAGGACACATAGCAAAATTATGCATTGTTTTTCTTCCTCTTCTTACTGCTTGCATGGTTGGAATTTCACGAGTGGATGACTATTGGCATCATTGGCAAGATGTGTTTGCAGGAGGACTTCTGGGTTTAGTCGTGGCAACCTTTTGCTATATGCAGTTCTTCCCTGCCCCCTATAGTAATGAAGGATGGGGTCCATATGCATATTTCCGAGCAATGGAGGAATCACGAGGCAACAATGGAAACACGGATAGGGAGTCGCCCGTTGTGCAGGCGATGGAGGAAGGGGTTACGAATCAAGAACCAAGGAGAAATGGTGATACCTTTACGCCTTACCCTTTTCGTAGCCCAACCTTGGAAGCCATGGAAATGGAAAACAAGTAA 1017 0.4543 MASASQGSSSFQRFWASFRGGMRLPVDPSAHTIKSHGAALARNHVRDWLILLLLIVIEVVLFVIKPFYRFVGRDMMEDLKYPMQENTVPVWAVPLYAVLLPMAVFLLFYMRRRDVYDLHHSVLGLLFAVLITGVLTDAIKNAVGRPRPDFFWRCFPDGVENYDKWGDVVCHGKESDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDQKGHIAKLCIVFLPLLTACMVGISRVDDYWHHWQDVFAGGLLGLVVATFCYMQFFPAPYSNEGWGPYAYFRAMEESRGNNGNTDRESPVVQAMEEGVTNQEPRRNGDTFTPYPFRSPTLEAMEMENK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00301 338 FunFam Lipid phosphate phosphatase 2 42 273 - -
Vian3g00301 338 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 44 271 IPR036938 -
Vian3g00301 338 Pfam PAP2 superfamily 122 266 IPR000326 -
Vian3g00301 338 SMART acid_phosph_2 122 262 IPR000326 -
Vian3g00301 338 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 42 274 - -
Vian3g00301 338 MobiDBLite consensus disorder prediction 306 326 - -
Vian3g00301 338 CDD PAP2_containing_1_like 79 265 - -
Vian3g00301 338 PANTHER LIPID PHOSPHATE PHOSPHATASE 33 304 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00301 Vian-Chr3 2858389 2863646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00301 29 321 Lipid Metabolism Gene Families AT3G02600 65.574 1.57e-153 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00301 3 2858389 2863646 Vian3g00301 3 2858389 2863646 ECH