Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00281 ATGAAGGGCCAAAATAATCAATACCCCTTAAACTCTGTTTCCAAGTTTTTCAATGCTCAATTTCACTTTGTTCGGTTCATCGCCTATATCGTTATTCTGGGCTTTGGTATAACCATTGGGGTTATCTTCAGTTTCTATCTTAGGAACTGCAACTTTAGTCTACAATTCACGCAGTTGTCACTCTCTTCCTTTCCGAGAACACAAATCCTGCCAACACCAACAGCAAAACCAGAAATATCTAATCAAACTCAAATTCAGACACAGATTCAAACTCAAACAGAAATCCTCACAGTAACTCAAACTGAAATTCAAACTGAGAGTGGTCATGTAGGATTGAAGGATTTCCTTCAGCCTCCCGAAGTTGTGCATGACATGGACGATGAGGAATTGCTTTGGAGAGCTTCAATGACTGCAAAGATCCCTGATTACCCGTTTGACCGAGTTCCGAAGGTTGCCTTCATGTTCTTGACAAGGGGTCCTCTGTTTTTGGCACCTTTGTGGGAGAAATTCTTCGAAGGGAATGAAGGGTTGTATTCAATTTACGTGCACTCCAATCCGTCCTACAATGGATCACGCCCGGAGAGTCCTGTATTTGAAGGTCGAAGAATTCCCAGTAAGGAAGTGGAATGGGGCAATGTGAACATGATTGAAGCCGAACGTCGCTTGCTGGCCAATGCACTCCTTGATATCTCAAACCAACGCTTTGTACTGCTGTCAGAGTCGTGCATACCACTCTTCAACTTCTCAACCATCTACACTTACTTGATGAACTCTACCCAAAACTATGTCATGGCATTTGATGATCCAAGTTCGGTTGGCCGAGGCCGGTACAGTATCCAGATGTTGCCCGATATCTCCCTCGACCAATGGAGAAAAGGGTCCCAATGGTTTGAAATGGACAGAGAGCTTGCACTAGAAGTAGTATCTGACAAAAAATATTTCCCAGTTTTTCAAGAGTACTGCAAAGGTTCATGTTACGCAGACGAACATTACTTGCCAACGTATGTGAGCATCAAGTTTTGGGAGGGGAATTCAAACAGGAGTTTAACTTGGGTTGATTGGTCAAAGGGTGGTCCACACCCTGCTAAGTTTCTGAGGTCGGAGATTACTGTCAAGTTCCTAGAGAGTTTAAGGAATCAGAAATGCAATTATAACGGAGATAGCATCAATGTCTGTTTTCTGTTTGCTAGGAAATTTGCACCTAGTACTGTGTCCAAGCTCACGAAGATTGCACCCATGGTAATGCATTTCTAA 1254 0.4306 MKGQNNQYPLNSVSKFFNAQFHFVRFIAYIVILGFGITIGVIFSFYLRNCNFSLQFTQLSLSSFPRTQILPTPTAKPEISNQTQIQTQIQTQTEILTVTQTEIQTESGHVGLKDFLQPPEVVHDMDDEELLWRASMTAKIPDYPFDRVPKVAFMFLTRGPLFLAPLWEKFFEGNEGLYSIYVHSNPSYNGSRPESPVFEGRRIPSKEVEWGNVNMIEAERRLLANALLDISNQRFVLLSESCIPLFNFSTIYTYLMNSTQNYVMAFDDPSSVGRGRYSIQMLPDISLDQWRKGSQWFEMDRELALEVVSDKKYFPVFQEYCKGSCYADEHYLPTYVSIKFWEGNSNRSLTWVDWSKGGPHPAKFLRSEITVKFLESLRNQKCNYNGDSINVCFLFARKFAPSTVSKLTKIAPMVMHF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00281 417 Pfam Core-2/I-Branching enzyme 151 377 IPR003406 GO:0016020|GO:0016757
Vian3g00281 417 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 70 408 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00281 Vian-Chr3 2647830 2650037 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00281 3 2647830 2650037 Vian3g00281 3 2647830 2650037 ECH