Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00265 ATGAGGCTTTCCATACTGCAACCTCAGCCGCAGCGCTGTCACCACCCGATAAAGCGGTGGCCTCGCATGGACGCTTCCTTCCACCGCCGCAAGGACAAGGTCGTTGTCATCATGGGCGCCACCGGCTCCGGCAAGTCCCGTCTCTCCATCGACCTCGCCACCCTCTTCCCCGTCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGCGGACTCGACATCACCACCAACAAGATCCCCCTCGCGCAGCGCCGTGGCGTCCCTCACCACCTTCTCGGCGACGTCGACCCCTCCCTACCGGAGTTCTCCCCCGCCGACTTCCGTCGCCGCGCTGGCCACATCATTGACGACATCAGCAGCCGGGATTGCCTCCCCATCGTCGTCGGCGGCTCTAACTCCTTCGTCCACGCGCTTCTCGTGGAAGACTTCCAGCCTGACTCCAACGTCTTCCAACACGCCGAGCGGCTTATATCCTCCGAGTTGAGGTACAAGTGTTGCTTCCTCTGGGTCGACATAGCTTTCCCTGTGCTATCGCAATACTTGTGCCACCGAGTCGACGACATGCTCCAATCGGGGATGGTCCAGGAGTTGGCTCAGTTCTTCGACCCCGAGGCTTCCCGTCGAACCGGGTCCGGTCTCAGAAAAGCCATTGGGGTTCCCGAGTTCGACCGCTATTTTAATATGTACCCACCCTGGGCCGGCCCCGCGGGCCCGGGCGAGGATCCTCTGCGGAAGCGTGCGTACGAGGAAGCGGTGCGGGCGATCAAGGATAACACGTGCGAGTTGGCGGAGCGTCAGATGGAGAAGATCGAACGGTTGATGCGTGCCGGGTGGGACCTACGGAGGATCGACGCTACGGAAGCGTTTGGGGTGGTGCTGACGTCAGGGTCCAACAATGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAGACGCTTCTTGATGGAGTAG 972 0.6039 MRLSILQPQPQRCHHPIKRWPRMDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPVSEIINSDKMQVYRGLDITTNKIPLAQRRGVPHHLLGDVDPSLPEFSPADFRRRAGHIIDDISSRDCLPIVVGGSNSFVHALLVEDFQPDSNVFQHAERLISSELRYKCCFLWVDIAFPVLSQYLCHRVDDMLQSGMVQELAQFFDPEASRRTGSGLRKAIGVPEFDRYFNMYPPWAGPAGPGEDPLRKRAYEEAVRAIKDNTCELAERQMEKIERLMRAGWDLRRIDATEAFGVVLTSGSNNGSDVWERQVLEPSVKIVRRFLME 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00265 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 175 281 - -
Vian3g00265 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 31 321 IPR039657 -
Vian3g00265 323 Gene3D - 31 321 IPR027417 -
Vian3g00265 323 Pfam IPP transferase 159 269 - -
Vian3g00265 323 Pfam IPP transferase 68 145 - -
Vian3g00265 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00265 Vian-Chr3 2442054 2443025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00265 163 321 C2H2 Transcription Factor Family AT2G27760 30.387 9.32e-13 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00265 3 2442054 2443025 Vian3g00265 3 2442054 2443025 ECH