Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00261 ATGGCCACTGCTTTTCTCATTCCACTCTCATGGTCACCGCAGCTGTCTACTCCTTTCAAGGGAACAGTGAAAACCTTAGTTGCAAAACCATGTGTGAAGATTCAGCGAGCAAGACCCATCGTTTTCGCAGGTTACAAGTCTACCTCTGCCCCGGTGGCAACGCCCCTGGTCGGCGTTCGGTTTCGGCTGGACAATTTGGGGCCCCAACCGGGTTCCAGGAAGAGGGCAAAGAGAAAGGGTAGAGGAATATCTGCAGGGCAAGGAGCAAGTTGTGGTTTTGGGATGAGGGGTCAGAAATCTCGATCTGGGCCTGGAGTTAGGAAGGGTTTCGAAGGTGGTCAGATGCCCCTTTATCGACGAATCCCCAAACTCAGAGGAATCGCAGGAGGTATGCATGCGGGATTGCCCAAATATGTCCATGTAAATCTGAGAGACATAGAAGATGCTAAATTTAAGGAAGGGGAAGAGGTGTCTCTCGAGTCACTGAAGGCTAAAGGTGTGATTAACCCATCAGGAAGAGAAAGAAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTGAGCAAGAAATTGACGCTAAAAGCCCGTGCCTTTTCCACAGCAGCGAAGGAGAAACTTGAGAGTGCTGGATGTTCTCTCACCTTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTTGCTAAAAACCTTGCTCGTGCTGAAGAATACTTTGCCAAGAAGCGCGCTGCAGCTGCCACCGAGGCAGCCTCTGCTTGA 759 0.5033 MATAFLIPLSWSPQLSTPFKGTVKTLVAKPCVKIQRARPIVFAGYKSTSAPVATPLVGVRFRLDNLGPQPGSRKRAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVHVNLRDIEDAKFKEGEEVSLESLKAKGVINPSGRERRLPLKILGEGELSKKLTLKARAFSTAAKEKLESAGCSLTLLPGRKKWVKPSVAKNLARAEEYFAKKRAAAATEAASA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00261 252 Gene3D - 138 214 - -
Vian3g00261 252 PANTHER 50S RIBOSOMAL PROTEIN L15 49 234 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vian3g00261 252 ProSitePatterns Ribosomal protein L15 signature. 180 210 IPR001196 GO:0003735|GO:0005840|GO:0006412
Vian3g00261 252 NCBIfam 50S ribosomal protein L15 63 213 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vian3g00261 252 Hamap 50S ribosomal protein L15 [rplO]. 63 216 IPR030878 GO:0003735|GO:0006412|GO:0015934
Vian3g00261 252 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 87 213 IPR021131 -
Vian3g00261 252 SUPERFAMILY Ribosomal proteins L15p and L18e 64 215 IPR036227 -
Vian3g00261 252 MobiDBLite consensus disorder prediction 67 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00261 Vian-Chr3 2361930 2364828 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00261 3 2361930 2364828 Vian3g00261 3 2361930 2364828 ECH