Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00243 ATGGCTACTCTTACCTCAAACGCATACCTTAGCCCACAATACAATGTTCCCAAAGACCATCATCTACCTCATGGTTGTGTAGTTGAGGAAATATCAGGGCTTATTAGAGTTCACAAAGATGGATACGTGGAACGACCACAAGTTCTTCCATGTGTCACTGCTAGTACTATTAGTCCAGAGCTAAATGTGACATCTGGAGACATGGTCATTGACAGTGCCACGAACACATGGGCACGTTTTTACGTTCCAATTTGCCAACACGAGTTGCCATTGCTCGTTTATTTCCACGGTGGAGGCTTTTGTGTTGGGTCAGCAGCATGGAGTTGCTACCATGATTTCCTTGCAAGGCTATCTGCCGAAGTGCGGTGTGTGATTATGTCAGTGAACTATCGATTGGCCCCAGAGAACCCTCTTCCAGCACCCTATGACGACGGATTAAAGGCCCTAATGTGGGTGAAGCAACAAATGCTATATGAACAACACGAGGGTAGTGGTAGTAACAGTGAATGGTGGACTACAAAGTGTAACTTCTCCAGTGTCTTCTTGGGCGGGGACAGTGCTGGTGCTAACATAGCCTACAACGTTGCCACAAGGGTAGCTGCATGTGATGGTGTTGCTTTAAGGCCTTTGAGTCTGAAAGGTCTTATTTTGATACAACCCTTTTTCGGTGGGGAAGTAAGAACAGGTTCTGAGAAATGCATGGCTCAATCATCGGGTTCTGCTTTGAACTTGGCAGCATCTGACACTTATTGGCGCTTGGCGTTACCCTGCGGTGCGAACCGGGACCATCCGTGGTGCAACCCTTTGGTGAAAGTGAAGTTGGAGCAGTTGAAGGTCTTGCGTACCTTGGTGTGCATCTCGGAGATTGATATATTGAAAGATAGGAACTTGGAGTTTTGTGATACTTTGGTTAGAGCAGGGAAAAGGGTTGAGTTTGAGCTGTTCAGAGGTGTTGGACATGCGTTTCAGATTTTGGGTAAGTCTCAGATATCCAAGAACAGAACTAAGGAAATGATGGCTCGTGTTAAATCCTTCATGGCTCTCTGA 1047 0.4632 MATLTSNAYLSPQYNVPKDHHLPHGCVVEEISGLIRVHKDGYVERPQVLPCVTASTISPELNVTSGDMVIDSATNTWARFYVPICQHELPLLVYFHGGGFCVGSAAWSCYHDFLARLSAEVRCVIMSVNYRLAPENPLPAPYDDGLKALMWVKQQMLYEQHEGSGSNSEWWTTKCNFSSVFLGGDSAGANIAYNVATRVAACDGVALRPLSLKGLILIQPFFGGEVRTGSEKCMAQSSGSALNLAASDTYWRLALPCGANRDHPWCNPLVKVKLEQLKVLRTLVCISEIDILKDRNLEFCDTLVRAGKRVEFELFRGVGHAFQILGKSQISKNRTKEMMARVKSFMAL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00243 348 Gene3D alpha/beta hydrolase 33 347 IPR029058 -
Vian3g00243 348 SUPERFAMILY alpha/beta-Hydrolases 41 344 IPR029058 -
Vian3g00243 348 PANTHER ARYLACETAMIDE DEACETYLASE 29 331 - -
Vian3g00243 348 Pfam alpha/beta hydrolase fold 92 323 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00243 Vian-Chr3 2146766 2147812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00243 1 346 Carbohydrate Esterase AT5G16080 53.258 3.52e-121 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00243 3 2146766 2147812 Vian3g00243 3 2146766 2147812 ECH