Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00240 ATGATGGATTCCCCCTCTTCCTCCTCCTCTGAGTTCGTTTCCATAGCCACCGCCAATCAGAGTGCGGCCAGGAGCAGTGGAGAACGGGTGGCTACGGAGCAGTCGCGGCGGTGGCATGACGTGTTCTGGTTAGGAATATTCTTAATCCATTTGATTGGGTTTGGGTTCCTTCTGGGGGTTCTTGGTCTAAATAGGTTTGAGAGAGAGAATAGACTTAACATTGACAAGTTTACCTCCCGGTTTTCTGAGAACCAATCCGGGTTGACTGAGACTTACTGGCCCCTTTATGCTGCTGCTGGTGGGGTTGGGACTCTTCTTGGATGGGGTTGGTTGTTGTTGTTGGGCTCCCAGGCAACTCAAATGATGAAGGTGTCTGTTCACATACTTACCACTTACCTTGCTGTGGTCAGTGTTTTGTGTTTCTGGGCTGGCCAGATTTTCTGGGGGGTTGCTTTTGCCATTGGAGCTCTTCTGCAGTTCCTTTATGTCATATCAGTCATAGACAGACTCCCATTTACGATGTTGATTCTGCAAAAGGCTGTGAAGATGATTTGGAATCTTCCTGAGGTTATGAGAGTGGCATATGCTTTTATGTTTGTTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTCTCTCTGTGAGCTTGTTTTGGACAGGTGCAGTACTATGTAATACTGTGCATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTTTTCATGGTGGTAGAGATGCAGCTTCGATTCCAGCTAACTCCTTAGTGAAATCTCTACAGTATGCTTTAACTACATCGTTTGGCAGCATTTGCTATGGTTCATTATTTACTGCAGCAATTAGGACACTACGATGGAAGATACGAGGATTTCGGTCTAAGATAGGCAATAATGAGTGTTTACTTTGCCTTGTTGATTTCCTTTTCCATCTCGTGGAGACTCTTGTTCGTTTCTTTAACAAGTATGCCTATGTTCAGATTGCTGTTTACGGTAAAAGCTTTAACCGGTCGGCTAGAGATGCATGGGAGTTACTCCAGTCGACTGGGGTTGAAGCACTTGTGGCCTATGATTGTTCGGGTGCTGTGCTTCTAATGGGTACTATTTTTGGTGGACTGATAACCGGAACTTGCTCTGGTATTTGGGCATGGGTTAAATGGAGTGACAGAATTATTATGATCGGATCCACGTCCATGCTGATGGGGATGGTATTGGTTGGATTGGCAATGGTCGTGGTTGAAAGTGCTGTTACATCCATATACATCTGCTATGCAGAGGACCCCTCATTGATTCAAAGATGGGACGCTGAATTTTTCAACCAAATGTCTGAGACACTTCATCAGCGACTTCAATATAGAAGTGCTCGAGCAAGGGAAGTTTTAACACACAATCGATTCGATGACCTTGTACCCCAAAACGCACGTATCTGA 1482 0.4548 MMDSPSSSSSEFVSIATANQSAARSSGERVATEQSRRWHDVFWLGIFLIHLIGFGFLLGVLGLNRFERENRLNIDKFTSRFSENQSGLTETYWPLYAAAGGVGTLLGWGWLLLLGSQATQMMKVSVHILTTYLAVVSVLCFWAGQIFWGVAFAIGALLQFLYVISVIDRLPFTMLILQKAVKMIWNLPEVMRVAYAFMFVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFLVLFHGGRDAASIPANSLVKSLQYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGNNECLLCLVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNRSARDAWELLQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGIWAWVKWSDRIIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPSLIQRWDAEFFNQMSETLHQRLQYRSARAREVLTHNRFDDLVPQNARI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00240 493 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 7 469 IPR007603 GO:0022857|GO:0055085
Vian3g00240 493 Pfam Plasma-membrane choline transporter 151 445 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00240 Vian-Chr3 2124059 2127901 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00240 3 2124059 2127901 Vian3g00240 3 2124059 2127901 ECH