Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00226 ATGGACTCCTCGTCGTTTTCGAGCTTCCGCGCCTACCTCCGCGCCCTCTCTCACACCCCCACGCGCCTTGCACGACGCGCCCTCTCCGTCTCCACCTCCTACGACGAGATGAGCCACGTCCGCGCCCGCTCCGGCACCACCATGCGGAAGACCCTCCGCTGGTACGACCTCGTCTCCCTTGGCATCGGCGGAATGGTCGGCGCCGGTGTCTTCGTCACCACCGGCCGCGCCACCCGCCTCTACGCTGGCCCCGCCGTTCTCCTCTCCTACGCCATTGCCGGCCTCTGCGCCCTCCTCTCCGCCTTCTGCTACACCGAGTTTGCCGTCGACATGCCCGTCGCCGGCGGCGCCTTCAGCTATCTCCGGGTCACCTTCGGTGAATTCGCAGCTTTTATGACCGGCGCGAATCTCGTGGTGGACTACGTGCTTTCCAATGCCGCCGTCGCCCGAGGCTTCACGGGCTACCTCGGCACCGCAATCGGAATCTCCTCCTCAAAATGGCGGCTCACGGTGCCGTCTTTTCCGCACGGCTTCAACGAAATAGACGTCGTCGCTGTCGCCGTTGTTTTGCTCATTACTCTCGTCATCTGCTACAGCACGAGAGAGAGTTCGGTGATGAACATGATTCTCACGGCGCTGCACATATTGTTCATAGCGTTCGTGATAATGGTAGGATTCTGGAGAGGGAGTTGGAAGAATTTCACCGAACCCGCTAACCCGGAAAACCCCGGTGGATTCTTTCCGCATGGCGCTGCCGGCGTTTTCAAAGGTGCCGCCGCTGTTTACTTGAGTTACATCGGCTACGACGCCGTTTCGACCATGGCAGAGGAAGTGAAGGATCCCGTGAGGGATATTCCGGTTGGAGTGTCCGGTTCCGTCGTTATCGTCACCGTTCTCTACTGTCTCATGGCCGCATCGATGACCAAACTTCTCCCTTACGATATGATCGATGCAGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATCGGACGGTTGGGGATGGGTGTCTCGAGTAATCGGGGTGGGGGCCAGTTTTGGGATACTGACGTCGCTGTTGGTGGCGATGCTGGGTCAGGCTCGTTACATGTGCGTTATCGGTCGCTCTAATGTGGTCCCCTCATGGTTCGCCAGGGTCCACCCAAGGACCTCCACCCCTGTCAACGCCTCCGCTTTCCTTGGGATCTTCACAGCGGCAATCGCCCTTTTCGCTGATCTTGATGTCCTGCTGGATCTGGTGTCAATTGGCACCCTGTTTGTGTTTTACATGGTGGCAAATGCCGTGATCTACAGACGTTATGTGGCAGCGGGGACAAGCAATCCATGGCCTACATTGTCCTTTCTGTGCTCGTTTTCCTTTACCGCAATGATGTTCACCCTTATTTGGAAATTTGTACCAACGGGAGGAGCGAAGGCAGGGATGCTGAGTGTCTCTGGTATTATTGCGATTGCAATATTACAACTTTTCCATTGCATGGTCCCTCAAGTTCGAAAACCAGAATTCTGGGGTGTCCCATTCATGCCGTGGATACCCTCCATATCTATCTTTCTCAATGTGTTTCTGTTGGGATCCCTGGATGGGCCATCCTATGTTCGTTTTGGCTTCTTTTCGGCTGTTGCGGTGCTTTTTTATGTCTTTTACAGTGTCCATGCTAGCTTCGATGCTGAAGGAGATGGTTCTTTGACTGCAAAAAATGGAGAAATCCACGTGGACTCCAAGGGAATTGAGGACCAAAGTTTCAAAGTATAG 1749 0.5546 MDSSSFSSFRAYLRALSHTPTRLARRALSVSTSYDEMSHVRARSGTTMRKTLRWYDLVSLGIGGMVGAGVFVTTGRATRLYAGPAVLLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFMTGANLVVDYVLSNAAVARGFTGYLGTAIGISSSKWRLTVPSFPHGFNEIDVVAVAVVLLITLVICYSTRESSVMNMILTALHILFIAFVIMVGFWRGSWKNFTEPANPENPGGFFPHGAAGVFKGAAAVYLSYIGYDAVSTMAEEVKDPVRDIPVGVSGSVVIVTVLYCLMAASMTKLLPYDMIDAEAPFSAAFSGKSDGWGWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSNVVPSWFARVHPRTSTPVNASAFLGIFTAAIALFADLDVLLDLVSIGTLFVFYMVANAVIYRRYVAAGTSNPWPTLSFLCSFSFTAMMFTLIWKFVPTGGAKAGMLSVSGIIAIAILQLFHCMVPQVRKPEFWGVPFMPWIPSISIFLNVFLLGSLDGPSYVRFGFFSAVAVLFYVFYSVHASFDAEGDGSLTAKNGEIHVDSKGIEDQSFKV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00226 582 Pfam Amino acid permease 53 483 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian3g00226 582 PIRSF AA_transporter 492 569 - -
Vian3g00226 582 PIRSF AA_transporter 35 493 - -
Vian3g00226 582 Gene3D Amino acid/polyamine transporter I 47 491 - -
Vian3g00226 582 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 27 552 - -
Vian3g00226 582 Pfam C-terminus of AA_permease 502 552 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00226 Vian-Chr3 1969885 1973816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00226 139 567 Organic Solute Cotransporters AT3G10600 73.893 0.0 659
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00226 3 1969885 1973816 Vian3g00226 3 1969885 1973816 ECH