Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g01814 ATGGCATCAAGAATCGCCGTTAAACAACAGGGCGCAGATGAAGCAGTAGTGAAAGGAGGGAAACAGCAGTGTGCAGCGAAAAGAAGGAACCGCAAGGCGTTAGGTGATATTGGGAATTTGGCCAATATAGGAGAAGTTGAAGTCAAACCTAATCGACCCATCACAAGGAGTTTTGGAGCTCTTCTACATGCCAAAGCACAAGCAGAAGCAGCAGCAGCCGCAGCTACTGATAAGAATAACAAGGTTTCTGCCAATGTGGCTGGACTTCCACCTGTTTCTAATGCAGTTGCACCGACCAAAAGAGTGGTCCAAAAACGGGGCCAGAGAAAAGTCACTGTAAAACCAAAACCTGAGAAACCCATCGACAAGGAAGCTATCCCAGATAAGAAGATTCGGAAAGACAAAACAAGGGAAGGAGATGACAACTCTAAGAAGAATTCACACGCTTTTACTTCAGTGCTCACGGCTCGAAGCAAGGCAGCAAGCGGCATAACAAACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTTGACAATGAGCTAGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTGTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAATGAGAGGTCGAGAGCTATACTGGTTAATTGGCTGATCGAAGTCAACACCAAATATAACCTTTCACTTGAGACCCTTTACTTGACAATCAATATCATTGATCGGTTCCTATCAGTTAAGAGAATTCCAAGGAGTGGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGGCGCCTGAGGTTAAAGGTATTGTCTGCCTTACAACTTATACTCATGAACAGATACTGGTCATGGAGAAAACCATACTGTATCAGCTGGAATGGACTTTGACTGTGCCAACACCTCTTGTTTTCCTGGTTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGCTGGGATTGGTGCACTATGCCACCATAATGTATTGCCCGTCAATGATTGCTGCCTCAGCAGTCTTCGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGTTGCACACAGGTTACTTACAAGAACAACTTATGGAATGTTCTAGATTATTGGTGAGTTTCCACTCCATGGTTGGGGATGAAGAAGAGCTGAAGGTAGTGCACAGAAAGTATTCTGATCCTCAGAAAAGAGCTGTTGCTATGCTCCCACCAGCTAATTATCTTCTGCCTGAAGGTTCTGTCTCTCAACAGAGTTAA 1350 0.4444 MASRIAVKQQGADEAVVKGGKQQCAAKRRNRKALGDIGNLANIGEVEVKPNRPITRSFGALLHAKAQAEAAAAAATDKNNKVSANVAGLPPVSNAVAPTKRVVQKRGQRKVTVKPKPEKPIDKEAIPDKKIRKDKTREGDDNSKKNSHAFTSVLTARSKAASGITNKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLVENENRPHDYIDSQPEINERSRAILVNWLIEVNTKYNLSLETLYLTINIIDRFLSVKRIPRSGELQLVGISAMLMASKYEEIWAPEVKGIVCLTTYTHEQILVMEKTILYQLEWTLTVPTPLVFLVRFIKATVPDQELENMAHFLSELGLVHYATIMYCPSMIAASAVFAARCTLNKTPLWNETLKLHTGYLQEQLMECSRLLVSFHSMVGDEEELKVVHRKYSDPQKRAVAMLPPANYLLPEGSVSQQS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g01814 449 Coils Coil 65 85 - -
Vian2g01814 449 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Vian2g01814 449 Pfam Cyclin, N-terminal domain 193 315 IPR006671 -
Vian2g01814 449 Pfam Cyclin, C-terminal domain 318 435 IPR004367 -
Vian2g01814 449 Gene3D - 206 316 - -
Vian2g01814 449 SMART cyclin_7 322 404 IPR013763 -
Vian2g01814 449 SMART cyclin_7 226 309 IPR013763 -
Vian2g01814 449 MobiDBLite consensus disorder prediction 111 145 - -
Vian2g01814 449 PIRSF Cyclin_A_B_D_E 1 449 IPR046965 GO:0016538|GO:0044772
Vian2g01814 449 MobiDBLite consensus disorder prediction 99 147 - -
Vian2g01814 449 Gene3D - 192 432 - -
Vian2g01814 449 FunFam G2/mitotic-specific cyclin-1 291 431 - -
Vian2g01814 449 SUPERFAMILY Cyclin-like 317 438 IPR036915 -
Vian2g01814 449 PANTHER CYCLINS 144 424 IPR039361 -
Vian2g01814 449 SMART Cyclin_C_2 318 436 IPR004367 -
Vian2g01814 449 CDD CYCLIN_AtCycB-like_rpt2 318 435 - -
Vian2g01814 449 SUPERFAMILY Cyclin-like 181 315 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g01814 Vian-Chr2 36529033 36531350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g01814 1 440 Core Cell Cycle Gene Families AT4G37490 47.609 9.81e-124 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00247 7 7486170 7489651 Vian2g01814 2 36529033 36531350 PCT