Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g00277 ATGGCTTTGTTCATGGCAATTCTTGGCGTTGTTGTGTTGGTGCTCTGTTTTTGCTCTGTTCTCTTGAAGTGGAATGGAGTGAGATACAGGAGGAAAGGCTTGCCTCCTGGCGCAATGGGTTGGCCAGTTTTTGGGGAGACAACTGAGTTTCTCAAGCAAGGTCCAAACTTCATGAAGAACAAGAGGGCAAGGTATGGCAGTTTTTTCAAATCTCACATTCTGGGGTGTCCTACCATTGTATGCATGGATCCGGAGCTGAACAGATTCATACTGATGAATGAAGCAAAAGGGCTTGTTCCTGGGTACCCACAATCCATGTTAGATATCTTAGGCACACGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCACTGCTCTCAATTATTAGCCCCACCTTGATCAGGGATCAGCTTTTACCAAAAATTGATGAGTTCATGAGAACCCACTTGATTGATTGGGATAACAAAGTCATAAACATCCAGGAGAAAACTAAAGAGATGGCTTTTCTCTCTTCCCTGAAGCAGATTGCTGGTATGGAATCCAGCTCAATAGCTCAACCCTTCATGACAGAGTTCTTCAAACTAGTTTTGGGAACACTCTCTTTGCCTATTAACCTTCCTGGCACAAATTATCGCGGTGGATTGCAGGCAAGGAAAAGTATTATCAGCATTCTGAGTCAGTTGCTGAAGGAAAGGATAGCATCCCAAGAATCCCACGTGGACATGCTGGGTTGCTTGATGAATAGAGATGAAAACCGATACAAACTAACTGATGAGGAAATCATTGATTTAGTTATTACTATTATGTATTCTGGTTACGAAACTGTTTCAACCACATCGATGATGGCAGTGAAGTATCTCCATGACCATCCCAAAGTTCTTGAAGAAATCAGAAAAGAGCATTTTGCCATAAGGGAAAGGAAAAAGCCAGAGGATCCAATTGACTGTAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTCGAGACCTCGAGATTAGCAACAATAGTTAACGGGGTTCTAAGAAAAACAACTCACGACATGGAGCTAAACGGGTATCTGATTCCTAAAGGGTGGAGGATATATGTATATACAAGAGAGATCAACTATGATCCATTTCTGTATCATGATCCACTGACCTTCAATCCATGGAGATGGCTGGGTAACAGTCTGGAGTCACAAAGCCACTTCTTGATTTTTGGAGGGGGCACCAGACAATGTCCAGGGAAGGAGTTAGGGATAGCAGAAATTTCCACTTTCTTGCACTACTTTGTAACAAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAGTTTCCTAGAGTTGTCGCACCAAATGGACTGCACATAAGGGTCTCATCTTTTACTAGCTAG 1401 0.4283 MALFMAILGVVVLVLCFCSVLLKWNGVRYRRKGLPPGAMGWPVFGETTEFLKQGPNFMKNKRARYGSFFKSHILGCPTIVCMDPELNRFILMNEAKGLVPGYPQSMLDILGTRNIAAVHGSTHKYMRGALLSIISPTLIRDQLLPKIDEFMRTHLIDWDNKVINIQEKTKEMAFLSSLKQIAGMESSSIAQPFMTEFFKLVLGTLSLPINLPGTNYRGGLQARKSIISILSQLLKERIASQESHVDMLGCLMNRDENRYKLTDEEIIDLVITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPIDCNDLKSMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYHDPLTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSFTS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g00277 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Vian2g00277 466 Gene3D Cytochrome P450 26 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PANTHER CYTOCHROME P450 26 32 442 - -
Vian2g00277 466 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 CDD CYP90-like 62 462 - -
Vian2g00277 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 FunFam Cytochrome P450 85A1 25 463 - -
Vian2g00277 466 Pfam Cytochrome P450 35 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian2g00277 466 SUPERFAMILY Cytochrome P450 28 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g00277 Vian-Chr2 2924196 2927706 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g00277 2 2924196 2927706 Vian2g00277 2 2924196 2927706 ECH
Vian8g00432 8 7284999 7288739 Vian2g00277 2 2924196 2927706 PCT