Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g04111 ATGAGAACCCAACACCTTCGCCTTCACCACCTCCTCCTCCTCAGTCTCTTCCTCTTCGCAGCCGCATTCTCTCCGGCGCCCACCGCCGCAGACGACGCTTCGGCCCCTGCGCCTGACGACGGCGACACCGAGTTCATCCGTTCCAGCTGCAACTCCACTCTATACCCTGACGTGTGCTTCACTTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGCTGGCGCGCGTGGCCATCGGCGTCAGTCTCTCCAAGGCCCACCGCGTCGCGTCCTACATCTCCAACATAACGCGTGAAGCCGACTATGGCACGAGTGGCACGCGCGCCGCGATGGCGCTGCACGACTGCTTCTCGAACCTGGGCGACGCCGTGGACGAAATCCGCGGGTCTCTGAAGCAGATGCGGCAGATTGGCGCAGCCGGCGAGGGCTCCGGATCCTTCCTCTTCGAGATGAGCAACGTGCAAACGTGGATGAGCGCCGCACTCACCGACGAGGAGACCTGTACGGACGGATTCCAGGACGTACCGGAATGTCCCGTGAAAGCGGATGTATGCAATCGCGTCACCAACGTCAAGAAGTTCACCAGCAACGCTTTGGCCCTCGTCAACTCCTACGCCAGCAAGGGTTCGCCCTGA 645 0.6264 MRTQHLRLHHLLLLSLFLFAAAFSPAPTAADDASAPAPDDGDTEFIRSSCNSTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKAHRVASYISNITREADYGTSGTRAAMALHDCFSNLGDAVDEIRGSLKQMRQIGAAGEGSGSFLFEMSNVQTWMSAALTDEETCTDGFQDVPECPVKADVCNRVTNVKKFTSNALALVNSYASKGSP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g04111 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 204 - -
Vian1g04111 214 SMART PMEI_2 41 204 IPR006501 GO:0004857
Vian1g04111 214 FunFam Pectin methylesterase inhibitor 1 41 208 - -
Vian1g04111 214 CDD PMEI-like_3 48 210 - -
Vian1g04111 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Vian1g04111 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 208 IPR035513 -
Vian1g04111 214 NCBIfam pectinesterase inhibitor domain 11 208 IPR006501 GO:0004857
Vian1g04111 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g04111 Vian-Chr1 64160693 64161337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g04111 43 204 Carbohydrate Esterase AT5G53370 28.049 9.22e-14 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g04111 1 64160693 64161337 Vian1g04111 1 64160693 64161337 ECH