Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g03558 ATGTGGAAGGACGGAATCCTGTTGCAGAAGCTAAAGGAGAAACGCCCCAAAGAAGAGCCAGACCAAGAAGCAAAACAAGAAGCTTCTAGGTGGAAGAAGTTGTCAAGAGCACAAGATTCAATCCTTAAATACGTGGTGAAGATCATGGAAGTTTGCAATGCTCAAGGTTTTGTCTATGGGATTATCTCTGAGAAGGGTGGGCCAGTGACAGGGTCTTCTGACAGCTTACTCAATGAATAG 240 0.4458 MWKDGILLQKLKEKRPKEEPDQEAKQEASRWKKLSRAQDSILKYVVKIMEVCNAQGFVYGIISEKGGPVTGSSDSLLNE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g03558 79 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 76 IPR006957 GO:0003700|GO:0005634
Vian1g03558 79 Pfam Ethylene insensitive 3 1 76 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g03558 Vian-Chr1 58274836 58275372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g03558 1 76 EIL Transcription Factor Family AT2G27050 58.025 2.74e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vian1g03558 EIN3 1.8e-26 No_clan