Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02826 ATGACGTCTCCTTTTTCGTACACATTCCCCATCAGTGGTGCTGGAAGTAGTACTACTACTAGCAATCTTACCACTGCCACTTACAGCACTTCTAGTCTATGGATGAACAGCAGAATATGGAGCAAGCTCCCTCAGAGGCTTCTCGACCGTGTCATAGCCTTCCTTCCTCCACCAGCTTTCTTTCGTGCACGTTGTGTTTGCAAGAGATGGTATGCCCTTCTCTTCTCCAACACCTTCCTTGAATTATACCTCCAAGTCTCTCCACACCGCCACTGGTTCATATTCTTCAAGCACCACAAAACTCGCAAGAGCTACATCTACAAGAACAACAACAACGGTAGTGGCTGTGGACATGGTGCAGCCTCTTCCTGTGAAGAAGGGTACCTCTTTGATCCCTCTGACATGGCATGGTATCGCATTTCCTTTGCTTTGGTTCCTTCTGGCTTCTCTCCAGCCTCTTCTTCTGCTGGTTTACTTTGTTGGGTTTCTGACGAGGCTGGTCCTAAGACCATGCTTCTGTGCAACCCTTTGGTTGGTTCTATCACTCAGTTACCTCCAACGTTGAGACCTAGACTCTTCCCTTCCATTGGCTTAACCATCAGCCCCACCTGCATAGATGTCACTGTTGCCGGGGATGACATGATATCTCCTTATGCAGTGAAGAACTTGACATCTGAAAGCTTTCACATCGATGGAGGAGGGTTTTACTCCTTGTGGGGCACTACCTCTTCTCTGCCTAGGCTTTGCAGCCTTGAATCCGGTCGAATGGTTTACGCTGAAGGAAAGTTTTACTGCATGAATTGCAGCCCTTTCAGCGTCCTGGCTTATGACATCACATCAAACAACTGGTTCAAAATACAAGCCCCAATGAGGAGGTTCCTTAGGTCTCCCAACCTCGTTGAGTGCAAGGGGAAGCTGCTTCTTGTTGCGGCTGTTGAGAAGAGCAAGCTGAACGTGCCAAAGAGTTTGAGGGTGTGGAGTTTGCAGGCTTGTGGGACGATGTGGGTGGAGTCAGAGAGAATGCCGCAGCAGCTTTATATTCAGTTTGCTGAATTAGAAGTTGGAAACGGGTTTGAATGTGTAGGGCATGGGGATTTTATTGTGATCATGATTCGTGGAACAGACAAAGCGTTGCTGTTTGATATATGCAGGAAGAGGTGGCAGTGGATTCCACCTTGTCCTTACATTGCACATGATGGCTTTGAATTGCATGGTTTTGCATATGAACCTAGACTCGCCACTCCTGTCACTGGTCTCCTTGATCAATTGGCTCTTCCCTTCCACACTTTTGGTGCTTAA 1299 0.4773 MTSPFSYTFPISGAGSSTTTSNLTTATYSTSSLWMNSRIWSKLPQRLLDRVIAFLPPPAFFRARCVCKRWYALLFSNTFLELYLQVSPHRHWFIFFKHHKTRKSYIYKNNNNGSGCGHGAASSCEEGYLFDPSDMAWYRISFALVPSGFSPASSSAGLLCWVSDEAGPKTMLLCNPLVGSITQLPPTLRPRLFPSIGLTISPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSLWGTTSSLPRLCSLESGRMVYAEGKFYCMNCSPFSVLAYDITSNNWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQACGTMWVESERMPQQLYIQFAELEVGNGFECVGHGDFIVIMIRGTDKALLFDICRKRWQWIPPCPYIAHDGFELHGFAYEPRLATPVTGLLDQLALPFHTFGA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02826 432 Gene3D - 35 80 - -
Vian1g02826 432 ProSiteProfiles F-box domain profile. 37 86 IPR001810 GO:0005515
Vian1g02826 432 PANTHER BNACNNG10540D PROTEIN 26 413 - -
Vian1g02826 432 SUPERFAMILY Galactose oxidase, central domain 64 395 IPR011043 -
Vian1g02826 432 SUPERFAMILY F-box domain 38 112 IPR036047 GO:0005515
Vian1g02826 432 SMART fbox_2 43 83 IPR001810 GO:0005515
Vian1g02826 432 FunFam protein UNUSUAL FLORAL ORGANS 36 80 - -
Vian1g02826 432 Pfam F-box domain 40 74 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02826 Vian-Chr1 44290563 44291861 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02826 1 44290563 44291861 Vian1g02826 1 44290563 44291861 ECH