Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02803 ATGGTTTTTCCAAGACCTCCTTCTGAGTCTGACCTCTTTCTCCATTCCAACTTTGCTTCTCGCTATGCAAGAGACTCTCTTCCTAGGTTCAGTATGCCTGAGGAGTCCATGCCAAAGGAGGCTGCCTACCAGAACATTCACGATGAGTTGCAACTTGATGCCATTCCAAAGCTTAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTATGTTGACATGGACGAATATCCTATCACCACTGATCTTCACAATCGGTGTGTGAATATGATAGCACGTTTGTTCCATGCTGAGATTGGAGAAGATGAGAATGCTATTGGAGCAGGAACTGTTGGGTCATCAGAAGCAATAATGCTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAACGTAAGGCAGAAGGCAAACCTTATGATAAGCCTAATTTGGTCACTGGCTCCAATGTACAAGTATGTTGGGAGAAATTTGCCAGGTATTTTGAGGTGGAGTTGAGGGAAGTGGAAGTGAGAGAAGGATACTACGTTATGGATCCTGCCAAAGCAGTCCAGCTGGTTGACGAAAATACTATTTGTGTGGCTGCAATATTGGGTTCAACGTACAATGGAGAGTTTGAAGACGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACTCCTATTCATGTGGATGCTGCAAGTGGTGGTTTCATTGCTCCATTCCTTTATCCAGAGCTGGAATGGGATTTCAGGCTGCCATTGGTGAAGAGCATAAACGTGAGTGGACACAAATATGGGCTTGTCTATGCTGGTATTGGTTGGGTTATTTGGAGGACAAAGGATGACTTACCAGAAGACCTTGTGTTCCATATCAATTACCTTGGAGCTGACCAACCCACTTTCACCCTCAATTTCTCCAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAACTAATTCGACTTGGCCAAGAGGGATACTTGAGCATAATGGAGAACTGCAGAGAAAACGCAATGGTGCTGAAGAAAGATTTGGAGAAGAGTGGGCGGTTTAACATACTCTCAAAAGACAATGGTGTTCCAGTGGTGGCATTTTCTTTGAAAGACAGAAGCCAGTACGATGAGTACAAGATATCAGAGATGCTGCGGCGGCACGGTTGGATAGTGCCAGCTTATCCAATGCCACCTGCTGCTCAGCACATCAATGTGCTCCGTGTGGTGATCAGGGCTGAGTTTTCACGCACCCTTGCTGAACGCCTTGCCTTTGACATACACAATGTGCTGCATGAGCTTGAAAAGTTACCTCCCCCCACAATGATCAATAACACTGAGGAAGTGAAGAAGGCCTTGGTTGATAATGGAGTCAAGAAAAATTCCATGGATACACAGAAGGAAATCATTGGTCAAGAATCCAACAAGCGTCAGAAAATCATGGCTGCCTAG 1482 0.4467 MVFPRPPSESDLFLHSNFASRYARDSLPRFSMPEESMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHAEIGEDENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVQLVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYLSIMENCRENAMVLKKDLEKSGRFNILSKDNGVPVVAFSLKDRSQYDEYKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLAFDIHNVLHELEKLPPPTMINNTEEVKKALVDNGVKKNSMDTQKEIIGQESNKRQKIMAA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02803 493 Gene3D - 1 65 - -
Vian1g02803 493 Gene3D - 66 360 IPR015421 GO:0003824
Vian1g02803 493 Gene3D - 361 448 - -
Vian1g02803 493 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vian1g02803 493 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian1g02803 493 SUPERFAMILY PLP-dependent transferases 16 446 IPR015424 -
Vian1g02803 493 PANTHER GLUTAMATE DECARBOXYLASE 10 486 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian1g02803 493 FunFam Glutamate decarboxylase 66 360 - -
Vian1g02803 493 FunFam Glutamate decarboxylase 5 65 - -
Vian1g02803 493 FunFam Glutamate decarboxylase 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02803 Vian-Chr1 43774743 43776810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02803 1 480 Calmodulin-binding Proteins AT5G17330 75.464 0.0 765
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02803 1 43774743 43776810 Vian1g02803 1 43774743 43776810 ECH