Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02800 ATGACTCATGTTCGTCTTGCTTATATTTGTTCTTCTTGCATTTCCATGGCTGCGATTTGGTTTGCGTCGCAGTGGAGAATGGAGAACAAAAGTGTTTCTTGTGGTGGCTCTTGTAGCGATTTCAGGCTCACGAAGACTGCTGGCTTGATTTTCCTGCAGTTTACCATGGAGATAAACAAGGATGAACGACCCTGCTTCTCTTCTCGCTTTGTTAGAGACTCTCTTCCCAGGTTTTCCATACCTCAGGATTCCATGCCTGGGGAGGCTGCTTACCAGAGCATACACGATGAGTTGCAGTTTGATGCTATTCCAAAGTTCAACTTGGCTTCCTTTGTCACAACTTCCATGGAAGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAGAACTACGTGGACATGGACGAATATCCTATCACCACAGACCTTCACAACCGGTGTGTGAACATGATAGCACGTTTGTTCCATGCTGACGTCGGAGAAGATGAGAATGCTATTGGAGCAGGAACTGTTGGGTCATCGGAAGCAATAATGCTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAACGTAAGGCAGAAGGCAAACCTTATGATAAGCCTAATTTGGTCACTGGCTCCAATGTACAAGTATGTTGGGAGAAATTTGCCAGGTATTTTGAGGTGGAGTTGAGGGAAGTGGAAGTGAGAGAAGGATACTACGTTATGGATCCTGCCAAAGCAGTCCAGCTGGTTGACGAAAATACTATTTGTGTGGCTGCAATATTGGGTTCAACATACAATGGAGAGTTTGAAGACGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAATAAGCAAACTGGATGGGAAACTCCTATTCATGTGGATGCTGCAAGTGGTGGTTTCATTGCTCCATTCCTATATCCAGAGCTGGAGTGGGATTTCAGGCTGCCATTGGTGAAGAGCATAAACGTGAGTGGACACAAATATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGACAAAGGATGACTTACCAGAAGACCTTGTTTTTGCACTAGTACAACTGTCAATGGCTAATCATCGATAG 1086 0.4457 MTHVRLAYICSSCISMAAIWFASQWRMENKSVSCGGSCSDFRLTKTAGLIFLQFTMEINKDERPCFSSRFVRDSLPRFSIPQDSMPGEAAYQSIHDELQFDAIPKFNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARLFHADVGEDENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVQLVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFALVQLSMANHR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02800 361 Gene3D - 53 113 - -
Vian1g02800 361 SUPERFAMILY PLP-dependent transferases 53 350 IPR015424 -
Vian1g02800 361 Gene3D - 114 360 IPR015421 GO:0003824
Vian1g02800 361 FunFam Glutamate decarboxylase 57 113 - -
Vian1g02800 361 NCBIfam glutamate decarboxylase 65 355 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian1g02800 361 PANTHER GLUTAMATE DECARBOXYLASE 62 355 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vian1g02800 361 Pfam Pyridoxal-dependent decarboxylase conserved domain 81 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02800 Vian-Chr1 43738045 43741530 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02800 65 352 Calmodulin-binding Proteins AT2G02010 79.861 3.48e-178 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02800 1 43738045 43741530 Vian1g02800 1 43738045 43741530 ECH