Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g02790 ATGGAAAACCATGTCCAGCACCCTTCGTCAAACGACGTCGTTGTCAACGTCAATGGCGACTCTGATTCTGAAGCTCGCCGCCTTCACCCAACTGACCATGCATTTTCCTCTCAGCAGCAACAACAACGACAGGCATGTCAATATTGGGATCCTGCCTCCCAAGCATTGTTATCAGCAATGGATGGACTTAGAGCACCTTTTCCTTCAGTTAGCAAATGTAAGTTTTGGAGTTCGAACGGTTTTACTGTGACCTGCGCTAGTGGAAGCACTCTCTGCAGTAGTTCTCATTGTTCTGTTTCTGTTGCAAAAGAGTTTACAGCATCATACACCACTATCCTAGCATATTTAAGGCTTTATCTCCCCACTATATATTCCACTTCTTTTGGAGAAATGGAAAATCTGGATGGCTTTTACTTGGTGGTACTGTACTTTGCATTACAGATAGCTTTTCTGTTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAGACAGCTTACCTGATCAAGCATCCCAATGATCATGATGATGGCTTCTACAAATTTATACCAACTTCAGTCTACTGGCCCATCTTTGTCATTGCCACTTCTGCTGCAGTTGTTGCTAGCCAATCATTAATATCAGCCACCTTTTCTGTAATCAAGCAATCAGTAGTCCTGGATTATTTTCCTAGAGTGAAGGTTGTCCACACATCTAAAAGTAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTGATGGTCCTTTGCGTAGCTGTGATTCTTATTTTTGGAGATGGAAAAGATATAGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTTATGCTTATCACCACTATATTGCTTACACTAGTCATGATCATGATATGGAGGACTCCTGCTGTGCTAGTTTGCCTTTACTTCGTCGTATTTTTTGTGATGGAAGGGATTTATGTTAGTGCAGTTTTCACCAAATTTGCTGAAGGTGGATGGATTCCTTTTGCAATATCATTCATCCTTGCTTTCATCATGTTTGGTTGGTTTTATGGTAGACAAAAAAAGACTGATTACGAATTAACCCACAAGATAACCTTTGAGAGACTTGAAGAGCTTTTAGCTGACCGCAGTGTTAATAGGGTTCCTGGGCTATGCTTCTTTTATACCAACATTCAAGACGGGTTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCATAAGGTCACAGTATTCACTACTCTTAAATATTTGTTAGTTCCAAAGGTTGCTCCACAAGATAGGATTGTAATCAAGAAATCAAATCTCAAAGGGGTATATTGCTGTATGATTCAGTATGGCTATGCAGATGCTCTAAATTTGGAAGGAGATCATTTTGTTGACCAAGTCATTAGTAGTTTGGAAAAACATATACAGAAGCATCAGTCTCCAGAGAATCTTTCTGATTCTGAAGAGACTGAAGAAGAGACCTCGAACTTAGAAGAAGCAAGGGTTGCTGGGGTAGTTCATGTTCGTGGAAAGACCAGATTTTACATTGGCCAAAACTGTAGCTGGTTTGATAAATTTGTGCTTAGTTTTTATGAAGTTATGCACAATAACTGTAGATCTGGTTTGCCTGCTCTTGGGATTCCACCGCAGCAACGGATTGAAGTTGGAATGCTATACGAAGCTTGA 1668 0.4053 MENHVQHPSSNDVVVNVNGDSDSEARRLHPTDHAFSSQQQQQRQACQYWDPASQALLSAMDGLRAPFPSVSKCKFWSSNGFTVTCASGSTLCSSSHCSVSVAKEFTASYTTILAYLRLYLPTIYSTSFGEMENLDGFYLVVLYFALQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPTSVYWPIFVIATSAAVVASQSLISATFSVIKQSVVLDYFPRVKVVHTSKSKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAVLVCLYFVVFFVMEGIYVSAVFTKFAEGGWIPFAISFILAFIMFGWFYGRQKKTDYELTHKITFERLEELLADRSVNRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTVFTTLKYLLVPKVAPQDRIVIKKSNLKGVYCCMIQYGYADALNLEGDHFVDQVISSLEKHIQKHQSPENLSDSEETEEETSNLEEARVAGVVHVRGKTRFYIGQNCSWFDKFVLSFYEVMHNNCRSGLPALGIPPQQRIEVGMLYEA 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g02790 555 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 145 554 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02790 555 Pfam K+ potassium transporter 145 448 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vian1g02790 555 MobiDBLite consensus disorder prediction 472 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g02790 Vian-Chr1 43458257 43462564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g02790 145 554 Inorganic Solute Cotransporters AT4G13420 37.093 1.32e-95 306
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g02790 1 43458257 43462564 Vian1g02790 1 43458257 43462564 ECH