Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00787 ATGAAGAAGTTCTCACTCTCACACTCCGATTTGGACTCTAAATGTGCCATCACTTTCTCACTCATGCGTTTGATGGCTTTTTTCGTCGCTGCTTTCGTCCTCTGCTCTGTTATTTTCTCTGTCTCCATTGTTCTTCGAGATCCTCCCTCAGATGCCGTCCTTCGCGAACCCTCGTCACTCACCCCTCTCTTTCAAATCACTCAAGATTTGGACAATGATACCTCTGATTCTGTTGAGTTGCTTCGAGATAAACTTCTCGGTGGCCTTCTAGTTGATGGATTTGATGAAAATTCCTGTCTCAGCAGATACCAATCAGCCGAATATCATATCAAAGGGCTGTCAGGAAAGCCTTCTTCTTACTTCATTTCTAGGTTAAGAAAATATGAAGCTCAACACAAACAGTGTGGACCTTACACTGAATACTATAACAATACAGTGGAACAACTTAGGTCTGGTAAATTTACAGAGTCCTCACCTTGTAAATATGTTGTGTGGATTGCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTCTATGCTCTTCTCACAAACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGGTTGATCTTTTTTGTGAGCCATTTCCAGATGCTTCCTGGTTTCTCCCTGCTGATTTTCCTCTTACCGCTCAGTTTAATAATTTTAGTCAGAATTCTGATCAATGTCATGGGAAAATGTTGAAAAATAAATCGGTTCTAAATTCCAATGTTCCTTCTTTTGTCTACCTTCACATAGTCCATGATTATGATGATCATGATAAGCTTTTCTTTTGTGATGAAGAGCAACATTTTCTCCAGGAAGTGCCTTGGTTAATGATGAAAACGGATAATTACTTTGTCCCGTCTCTATTCTTGATGCCATCATTTGAGCAGGAGCTGAATGATCTCTTCCCAAATAAGGAAACAGTTTTCCATTTCTTGGGTAGGTATCTGTTCCACCCCACTGACAGTGTGTGGGGACTTGTTACCAGATACTATCAAGCTTATTTAGCAAAAGTTGATGAAAGAGTGGGGATACAAATTAGAGTGTTTGACACAGAACCTGGCCCATTTGAATATGTATTGGATCAGATCTTAGCTTGTACTTTGAAGCATAAACTTTTGCCTGATGTTAACCATCAGCAGGATGCTACCAATTCATCAGGAAGTTCCAAGTCAAAAGCGGTGTTGATGACATCCTTAAGCCCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACAGTGACAGGAGAAGTGGTTGGTGTTTACCAGCCGAGCCATGAAGGATATCAACAAACAGAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTTTTGGTTACTAGCTCTTGGTCTACTTTTGGCTATGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACAGCCCCAGATCCTCCCTGTCGGCGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCCAGGCCAAGAGAGGAACTGACACAGGTGAACTTGTTCCATATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAGTGATACTTATCGCTAG 1662 0.4206 MKKFSLSHSDLDSKCAITFSLMRLMAFFVAAFVLCSVIFSVSIVLRDPPSDAVLREPSSLTPLFQITQDLDNDTSDSVELLRDKLLGGLLVDGFDENSCLSRYQSAEYHIKGLSGKPSSYFISRLRKYEAQHKQCGPYTEYYNNTVEQLRSGKFTESSPCKYVVWIAFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPDASWFLPADFPLTAQFNNFSQNSDQCHGKMLKNKSVLNSNVPSFVYLHIVHDYDDHDKLFFCDEEQHFLQEVPWLMMKTDNYFVPSLFLMPSFEQELNDLFPNKETVFHFLGRYLFHPTDSVWGLVTRYYQAYLAKVDERVGIQIRVFDTEPGPFEYVLDQILACTLKHKLLPDVNHQQDATNSSGSSKSKAVLMTSLSPGYFEKVRDMYWEYPTVTGEVVGVYQPSHEGYQQTEKQMHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCQAKRGTDTGELVPYVRHCEDMSWGLKLVDSDTYR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00787 553 Gene3D - 157 209 - -
Vian1g00787 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 333 487 - -
Vian1g00787 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vian1g00787 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 158 209 - -
Vian1g00787 553 Pfam Xyloglucan fucosyltransferase 66 520 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00787 Vian-Chr1 8233386 8235154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00787 5 547 Xyloglucan Fucosyltransferase1 AT2G03220 60.662 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00787 K13681 - gmx:100803305 970.304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00787 1 8233386 8235154 Vian1g00787 1 8233386 8235154 ECH