Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01516 ATGAACGAAGATGGCGTAAGCTCTGCCAATCCCAATCTCTCTCTTCCGAAACCACCTTCTTCTCCTCCCACACCTGCAGCAAGTTCTGCGGGGGCCTCGTCGCCGGCGTTTCCGCCCAATGGAGATGTTCGTCGCCGCCACAAATCAAGTGCGGATTCGCGCGAGGTTGTGGGTTCGTTGCTGCAAGGCTCTTCGGTTCCCTCCTGCCGGCCATGGGAGCGCGGCGATTTGCTGCGCCGCCTTTCGACGTTTAAGCTCGCCGGGAAATTGCCCAAGGTTGCTGGGTCGTTGGCTTGTGCGAAGAGAGGTTGGGTGAATGTGGGTGTTGCTAAGATTGAGTGTGAGATATGTCGTGCTCAATTAGATTTTGCCGTGCCTTCAGCTTCATCTTTTGAAGCTGATGGCTCCAGTGAAGAGTTTTCTGAACAGCTTGATAGAGGCCACAAAGTCACCTGTCCTTGGAGAGGCAATAGCTGTCCTGAAAGCTTGGTGCAGTTTCCTCCTACTTCGCCTTCAGCTCTAATTGGTGGTTTTAAGGATAGGTGTGATGGACTCTTGCAGTTTTATTCCCTCCCAATCGTATCTTCATCTGCAATTGAGCTTATGCGGGTTACACACAGCCCTCAAATTGATCATTTACTTGCTCAATTGCAAATTCAGACAGCTGGAGAATTGGGCTGCAGAGCAGAAAATGCTTCTGGAACGGGCATAACTGGAGAACAGGCCTGTCATTCATATTCTTATGCTCAAAAGCTAATAAGTCTTTGTGGATGGGAGCCACGATGGCTTCCTAATGTGCTTGACTGTGAAGAACAATCGGCTGAATCTGCAAAAAATGGGTATAGCTCTGATCCAGCCAAAGGATCTGCAGCTGATCCTGCTCCAAGCAAGAGGGAGTTTTCAACTTCTTCAAGGAAAGATACTGGGGACAATGATGTACTGGGTTCAGAGTTTAATTGTGAGTCTAGGTCACCATTGTTAGATTGTAGTTTATGTGGGGTTACAGTTAGAGTATGGGATTTCTTGACAGCTCCACGACCAGTTCATTTGACACCCTGTGGGATTGATACACCTCAAACAAGCAAGAAAATAGCATCAACTCGAGGAATAAGTGCAGCTAGTGGTATCAATGAATGGGCTGCTACTGATGGTGTTGAAAAAGAGAGGACTGGAGACCGTGATGAGGCTACAACATCCGAAAAAAAACTTGTATCCATTAAAAGTTTAGACATAAGTCTTAGGATGGCTAGTGGGCCATCCTCTTCACCAATAAACTTGACATCAACCTCAGGTCATGCGCAAGATGCTGGGGAAGAGAAACATCTGATGATTGGGCGGCCTTCTGGAAGTGAGGTTGGAGACCAGACGGCTTCTTATGAATCACAAGGCCCCACTGCTCGCAAACGCAAGTTGGATGATGGTGGAACCACTGCTGACAGGCAACATCTAAATGTGCAACAGGCAGACAGTGTTGAAAAAACTGTGACTGACCGCGATAATAATGAAGTCATTGGTAGTCAACTGTATTCAGCTGGCCCTTCAAAGCGTGCCCGTCATACTAATCTATTGGAAACATTCCAGTTTCCATTAAGAAATTCTTCTGCACCTAGCCATTCATTGGGTATTCAAATAGAACTGGATGCAAATATCCCTAACCAGTTAAACCCAGAAAGGGATCATGCCATTGGTGTTATGTCTACCAGAGATTCTGCTCAAGCATCTTCTATTATTGCAATGAATACAGTTTATCACAGTTCAGATGATGAATCAATGGAAAGTGTTGAAAATTTTCCTGTAGATGCTAATGATGTCAATTTCCCTTCTGTTGATTTGAACGAAGCATCAGAGCTAAATAGCAGCTATCAAGCACAGCAAAGTGCTTGTTTCCAGCCACTTTTAGATAGGGCAGGAGGGGAGGCAGGTGTTAGCAGTTCAAATGCTTGTGGGGAAGTTTTGAACATGGAGATACTGACTGCACATGCTAGAGATGGACCTAGTTTTGGTATTAGTGGGGGAAGTGTGGGCATGGGTGCAAGTCATGAGGCTGAAATCCATGGGACTGATGTCTCAGTTCATAGAGGTGATAGTTTAGGTGATGTTGAACCAATTGCTGAAGTGATTGAAAATCAGGGTCCACCTGGTGAATTTGAGCCTTATCATGGACATACTGGGGACTTTGTGCCTGAGGAAATGAGTCGGGAAGATCCTCAAGGGGATAGTCAAGCCATGGTGTCTCAATCTATAGCAAGGGCTGATAGTGGCTCAAAAATTATAGCTTCAACCAAGGTTGAATCTGTTGAAAGTGGTGAGAAGACCAGTTGTAGCATGCAGATGATAGACCCTGACAATGGTGCCCATCCGTCCCTTTCTTGTAATGCTGTTGTATGTTCTGCCTATGAAGTATCCAAGGAAGAAGTTACTCAGACTGGGAAGGCATCTCACATTGATGACGGTGCATATCATGAATCAGGCCATTTAAATACTGATGTTATGGGGATTCCTTACAGAGACATCAGTAATGGAGGTGTTGAATTTGATCCAATCAAATCACATAACGATCACTGTCCTTGGGTGAATGGGGATGTTGCTGCTGCTGGTTGCGATAATCCCTGCTCCAGTTCTGGTGTGGGTAGTGTGGCTCTTTGTGGCTGGCAGCTGACTTTAGATGCCCTGGACTCTTTCCAGTCTCTTGGACATCTTCCTCTCCAAACTCTTGAATCAGAATCGGCAGCATCTATGTGCAAGGGTGATCGGTTCACTTCCAGCCAGAAATTGTTAGCACGCAACTCCTATGTTAGAAACCAGGGGAAAAACTGA 2817 0.4604 MNEDGVSSANPNLSLPKPPSSPPTPAASSAGASSPAFPPNGDVRRRHKSSADSREVVGSLLQGSSVPSCRPWERGDLLRRLSTFKLAGKLPKVAGSLACAKRGWVNVGVAKIECEICRAQLDFAVPSASSFEADGSSEEFSEQLDRGHKVTCPWRGNSCPESLVQFPPTSPSALIGGFKDRCDGLLQFYSLPIVSSSAIELMRVTHSPQIDHLLAQLQIQTAGELGCRAENASGTGITGEQACHSYSYAQKLISLCGWEPRWLPNVLDCEEQSAESAKNGYSSDPAKGSAADPAPSKREFSTSSRKDTGDNDVLGSEFNCESRSPLLDCSLCGVTVRVWDFLTAPRPVHLTPCGIDTPQTSKKIASTRGISAASGINEWAATDGVEKERTGDRDEATTSEKKLVSIKSLDISLRMASGPSSSPINLTSTSGHAQDAGEEKHLMIGRPSGSEVGDQTASYESQGPTARKRKLDDGGTTADRQHLNVQQADSVEKTVTDRDNNEVIGSQLYSAGPSKRARHTNLLETFQFPLRNSSAPSHSLGIQIELDANIPNQLNPERDHAIGVMSTRDSAQASSIIAMNTVYHSSDDESMESVENFPVDANDVNFPSVDLNEASELNSSYQAQQSACFQPLLDRAGGEAGVSSSNACGEVLNMEILTAHARDGPSFGISGGSVGMGASHEAEIHGTDVSVHRGDSLGDVEPIAEVIENQGPPGEFEPYHGHTGDFVPEEMSREDPQGDSQAMVSQSIARADSGSKIIASTKVESVESGEKTSCSMQMIDPDNGAHPSLSCNAVVCSAYEVSKEEVTQTGKASHIDDGAYHESGHLNTDVMGIPYRDISNGGVEFDPIKSHNDHCPWVNGDVAAAGCDNPCSSSGVGSVALCGWQLTLDALDSFQSLGHLPLQTLESESAASMCKGDRFTSSQKLLARNSYVRNQGKN 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01516 938 MobiDBLite consensus disorder prediction 415 433 - -
Vian11g01516 938 MobiDBLite consensus disorder prediction 415 481 - -
Vian11g01516 938 Pfam C3HC zinc finger-like 71 193 IPR012935 GO:0008270
Vian11g01516 938 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 3 936 - -
Vian11g01516 938 MobiDBLite consensus disorder prediction 1 67 - -
Vian11g01516 938 MobiDBLite consensus disorder prediction 277 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01516 Vian-Chr11 25253636 25267969 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01516 11 25253636 25267969 Vian11g01516 11 25253636 25267969 ECH