Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01148 ATGGATTGTATGGATGATGACAGCATGAGTGGTGCTAACTATGGTATTCTTGATGACCCTTCAAGGAGAAATGCTGACGAAGAAACGATGAGGGTGGAAGAAGAAGAAGAGGAAGAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGGTGACAGTGGAGGAACTGGAGACAAGGATGTGGAGAGATGGCATGATGTTGAGGAAGCTGAAGGAAGAGAAGAGGGATAAGGAGAAAGGAGAAACGGTGGAGATGATGAAGAAGAAGGCACTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGGAGATTTGTGGTGTTCGTGGCTTCGTTTATGGCATCATTCCTGAGAAGGGAAAACCAGTCAGTGGAGCTTCTGATAACCTCAGAGGTTGGTGGAAGGATAGGGTCAAGTTTGATCACAATGGTCCTGCTGCTATGCTCAGGTACGAGGAAGAAACAGGGTTTGAAGACATGGTTAGTGATGGATTCAATGGACAGCCATTAACAGCATACAGTTTAAATGATCTCCCAGACACAACTCTTGGCTCACTCTTGTCATGTCTCGTGCAGAACTGTGATCCTCCCCGGAGAAGGTACCCTTTGGACAAGGGCATTGCCCCTCCTTGGTGGCCCACTGGGCAGGAATGGTGGTGGGCCCAGATGGGCTTTACCATAGACCCAGGCCCACCACCCTACAAGAAGCCCCATGACCTGAAGAAGGTGTGGAAGATGTGTGTGCTCACTGCAGTCATCAAGCACATATCCCCAGACATAGCAAAGATCAGAAACATTGTTCGTCATTCTAGGACCCTTCAGGACAAGCTCAATACAAGAGAATCTGCCATTTGGAGTGCTATTGTGAAGCGTGAAGAGTACTTTGCTAGGAGATCATACCCTAATTTCTTCCAAACCCTCCCTCCAAGAGCAGGACCTAGTGTCCCTTATGATAATAATGTTACAAATTTTATTAGGGGGCAACAAAGTAATAGCCTTGGTGGTACATTGAATCTTCTTGGGGGGCTGAATAACACACCACAACACCACAATGTTGCTAACGGTCGTGCTTGGAGCTTTCTCGATGGCCACAATAACCCTTCAACTTCCAGCAATGCTGCTACAATTCTTCTTGGGAACCCTCCACCAACCACCGATTTGATCACTGATGATGGTGCTACCAGTTTTCATGGAGTGCAGATTGATACAGCACCAGCCACAAATGGTGGAGCTAGAAATTTCTTTGTGGGGCAGTTCGATCCACCAACACCAACACCAATCAGCAATTTGGTTCATAGTGGATTCATAAGAGCTTTTCTGGATGGCCAATATAACCCACCACCAACATCCACAACTATAACAACAGCAAGAAGCAGTGTTGGTATTGGTAATGGCAGTAACATTACAATGATGAACAACATTGTTATGTCACTAGACCATGCTGCTAATAAGAGAAAGCCTGGGGATGATGTTCAAGGTATTACATTTCCTCATGAGGCCTATTCTTGCAACAGCTCAGAGTGCCCTTATCATGAGACTGGCTTTGGATTCAGTGACAGAAACGCGAGGAACAATCATCAGCTGACATGCCAATACAGAAGCAAAAATCCTTTGCAAGTGGTTGGAGTTGGAGGGTTAATGCCTTCTCAGATTGGATGTGGGAATTCTATTGTAAATATGCCTCTTGTTCAATCCAGGAACTTTACCTCATCAGTCACTGATCAAAATCAGACTTTTACTGTTGGGGACATGGGGATGCACAACATGAATGTTCCATGTCTTGCAGGCCAAAACCAGCATTTGCAAACTGTTCAGACTCAGGTGTACAATGATAGTTTCTTTGATGGAAGGATTTGTTTGGACAAGGATGTCTTTGGCAACAACATGTATGTGTGTTCTCTAGAAAGCAAAAACCAGCAGCAGGTGCAAAATGTTGGTGGTACCAGTGGCCACAGTTTGAATGCTGAAGTGTCCAATGTTGTCCATGGCAATTTGTCAACATCGATAACAGTGGATTCCCCCTTTGCATGGGATTCAAACAATTCCCAAGCTGAATTTTTGGACTCTCCTCTGTTGACAACAGCAGACCAGGATCTCCTTTGGCCATAG 2121 0.4517 MDCMDDDSMSGANYGILDDPSRRNADEETMRVEEEEEEEEDEEEEEEEEEVVTVEELETRMWRDGMMLRKLKEEKRDKEKGETVEMMKKKALIRAQDTVLKNMVKMMEICGVRGFVYGIIPEKGKPVSGASDNLRGWWKDRVKFDHNGPAAMLRYEEETGFEDMVSDGFNGQPLTAYSLNDLPDTTLGSLLSCLVQNCDPPRRRYPLDKGIAPPWWPTGQEWWWAQMGFTIDPGPPPYKKPHDLKKVWKMCVLTAVIKHISPDIAKIRNIVRHSRTLQDKLNTRESAIWSAIVKREEYFARRSYPNFFQTLPPRAGPSVPYDNNVTNFIRGQQSNSLGGTLNLLGGLNNTPQHHNVANGRAWSFLDGHNNPSTSSNAATILLGNPPPTTDLITDDGATSFHGVQIDTAPATNGGARNFFVGQFDPPTPTPISNLVHSGFIRAFLDGQYNPPPTSTTITTARSSVGIGNGSNITMMNNIVMSLDHAANKRKPGDDVQGITFPHEAYSCNSSECPYHETGFGFSDRNARNNHQLTCQYRSKNPLQVVGVGGLMPSQIGCGNSIVNMPLVQSRNFTSSVTDQNQTFTVGDMGMHNMNVPCLAGQNQHLQTVQTQVYNDSFFDGRICLDKDVFGNNMYVCSLESKNQQQVQNVGGTSGHSLNAEVSNVVHGNLSTSITVDSPFAWDSNNSQAEFLDSPLLTTADQDLLWP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01148 706 Coils Coil 22 60 - -
Vian11g01148 706 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 36 313 IPR006957 GO:0003700|GO:0005634
Vian11g01148 706 Gene3D - 81 156 IPR023278 GO:0003700|GO:0005634
Vian11g01148 706 FunFam Ethylene insensitive 3-like 1 171 307 - -
Vian11g01148 706 Pfam Ethylene insensitive 3 55 297 IPR047091 GO:0003700
Vian11g01148 706 SUPERFAMILY DNA-binding domain of EIN3-like 177 300 IPR023278 GO:0003700|GO:0005634
Vian11g01148 706 MobiDBLite consensus disorder prediction 30 51 - -
Vian11g01148 706 MobiDBLite consensus disorder prediction 1 51 - -
Vian11g01148 706 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01148 Vian-Chr11 18525874 18528133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01148 462 537 EIL Transcription Factor Family AT2G27050 28.205 3.24e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vian11g01148 EIN3 2.7e-101 No_clan