Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g01100 ATGGTGCAGCAAAAGAACCTAGTTGATGAAGTGTCCGGTTGGCTCAGAATCTATGATGACGGTTCGGTCGACCGGACATGGACCGGACCGGCCCAGTTCAAGTTTATGTCTGATCCGGTTCCTTCTCATGAAAAATTTATAGATGGTATTGCAGTTCGTGATACCATCATTTCTCGTGAAGGCCATGACCTCCGTGTTCGATTATACTTGCCGGAGAAAGCGTTGGAAAGTAAAAAAAAGTTACCCATCATTCTTCATTTTCAGGGTGGTGGGTTTTGCATCAGTGAACCGGACTGGTTCATGTACTACCAAATTTACGTTCGAGTTGCCCTTTCAACTCAGGCAATTGTAGTTTCTCCTTTCCTCCGACGTGCACCGGAGCACCGTCTCCCAACCGCCATTGATGACGCCTTTGACACCCTCCTCTGGCTCCAATCTGTGGCCCGGTCCGGTTCGCGTGAACCGTGGCTCGAGCAACATGGGGACTTCAACCGGCTTTTTCTCATAGGGGACAGTTCTGGCGGGAACGTGGTGCATGAGGTGGCTTCAAGGGCCGGTTCAGTGGACCTAAGCCCGGTTCGGGTTGCAGGAGCGATCCCGGTTCACCCCGGGTTCGTCCGGTCAGAGCGGAGCCGGTCCGAGCTGAAAATGCCACAATCACCGTTTTTAACGTTGGACATGCTCGACAAGTTCCTAGAGTTAGCACTGCCGGTCGGGGCGACGAAGGACCACCCAATAACGTGCCCGATGGGTGAGGCGGCACCGGCTCTTGAAGGGCTGAAACTGCCGGCGGTGCTGCTGTGCGTGGCGGAGATGGACTTGGTGAGGGACACGGAGATGGAGTACTATGAGGCCATGAAGAAAGCCAACAAGGACGTTGAACTTTATGTGAGCCATGGAATGAGTCATAGTTTTTATTTGAACAAGGTTGCTGTGGATACGGACCCCAATGTTAGTGCAAAAACCGATGCTTTCATAACTAAGATCAAGGAGTTCATCCAGGAGCACTGA 1011 0.5223 MVQQKNLVDEVSGWLRIYDDGSVDRTWTGPAQFKFMSDPVPSHEKFIDGIAVRDTIISREGHDLRVRLYLPEKALESKKKLPIILHFQGGGFCISEPDWFMYYQIYVRVALSTQAIVVSPFLRRAPEHRLPTAIDDAFDTLLWLQSVARSGSREPWLEQHGDFNRLFLIGDSSGGNVVHEVASRAGSVDLSPVRVAGAIPVHPGFVRSERSRSELKMPQSPFLTLDMLDKFLELALPVGATKDHPITCPMGEAAPALEGLKLPAVLLCVAEMDLVRDTEMEYYEAMKKANKDVELYVSHGMSHSFYLNKVAVDTDPNVSAKTDAFITKIKEFIQEH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g01100 336 PANTHER ARYLACETAMIDE DEACETYLASE 9 307 - -
Vian11g01100 336 Gene3D alpha/beta hydrolase 15 336 IPR029058 -
Vian11g01100 336 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Vian11g01100 336 SUPERFAMILY alpha/beta-Hydrolases 7 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g01100 Vian-Chr11 17281736 17282746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g01100 7 326 Carbohydrate Esterase AT1G68620 33.333 4.46e-52 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g01100 11 17281736 17282746 Vian11g01100 11 17281736 17282746 ECH
Vian11g01100 11 17281736 17282746 Vian5g00182 5 3608577 3609575 PCT