Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00038 ATGGGTGATGTAGGGAAGATTTTCAAGAGCTTCAAAATATTGTTAGTTGTAGCTTTCATAACCTTCTCTATCTTGGTCACATTTTTTGTCCTACACAAAAACTCAGTTTTTGACATCTTCAAAGAATTTAATGCATTTATAGAAGAAAAAAAGAATCTCAACATTAGTGAGCCAGATAAAGATCTAAAAAATAATACATTTGAAGCTGTAAAGGATGATCTGTCTCTATCTACTACCAGTGGTAATGATAAGTTGTTTGGTGGGCTTTTAGTTTCCTCATTTAATGAATCGTCATGCATTAGTAGGTTTCAATCTTATTTGTATCGAAAAGCTTCTCCTCACAAGCCTTCTAAATATTTGATATCCAAGTTACGAAACTATGAACATCTTCATCAACGATGCGGACCTTATACTAAATTCTACAACGAAACCATGGAAAATGGTGCAAAACGTAGCAACAATTATGTTGATTTAAGGTGCAAATATCTTGTTTGGATAGCCTCAGATGGCTTAGGGAACAGGATGATATCCTTGGTTTCAACGTTTCTCTATGCAATTCTTACAAATCGTGTTCTTCTTGTTAGATTTGACGTTGATATGTTAAATCTCTTTTGTGAGCCATTTTTTGATTCCTCATGGTTGTTGCCCAAAAATTCCCCTTATTGGAATGATCTAAAACAATTTGAAACACATGAAACCCTATCTATGAATAATAAGAAAAACAATTCACTTGAGTTTGTGCCACCGGTTCTTGTTCTTGATTTAACACACACCCATGTTGGTCATACTAATCTTTTTCATTGTGATCAAAATCAAGATCTTCTGCAAAAAGTTCATGTGATGATCTTACAGTCAAATCAATATTTTGTCCCTTCTCTTTTCATGATATCCTCTTTTAGACAAGACTTGAACAAAATGTTCCTTGATAAAGACACGATTTTTCACTATCTTGGACGATACCTTTTTCACCCATCGAATAGGGTATGGGAACGGATTCGAAAATTGTATGAGGCAAACCTAGCCAAGGAAAATGAGAAGATTGGCCTACAAGTTAGAGTATTTAATATCCACCATCCACCAACACAAACCATTACCAACGAAATTATATCTTGTGTCCATCAAGCTAAGTTGTTGCCAAAATTCAATGTGCAAAGCTCAATGAATCATCATTTAAAAAATAATACCTCAAAAGTTGTTTTAGTAGTATCTTTATACTCTCAATATGGTGAGAAACTAAAGAGTATATATGAAAGTAATACAAGTTTGAGTAGAGAAGTAATAAAAGTGTATCAGCCAAGTCATGAAGAGCAACAAAATTCAAATGATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGTTGAGTTTGTGTGATGCATTAGTTACAAGCTCGATGTCCACTTTTGGGTATGTTGCTCATAGTCTTGGAGGATTGAAGCCATGGATTTTGCAACCTATATATGGGGAAACTGTACCAGATCCACCTTGTCAACGAGCCAAGTACGTTGAGCCTTGTTTTCATTATCCTCCAAAATATGCTTGTAAGACTAATGTCACAGTGGATTTTACTTCTCTTTTTCATCATATTACACATTGTGAAGATGTATCTAGTGGAGTTAAAAACTCAGTTTTCGATCTCGTCCATGGATTTAACGTTTTGGCTGTTAGAGCTCACAATGCTTCTAATAATGTCTTGAAACAAGGAACTCAAAATGCGATCACTACTAATGTCGTGCACGAAGGAGCTCAAAATGCCTCAATACAAGAGTTTCAAAATGCTACCGTTAAAACTGGGGAAGAAAAGGATCATAATGTTATTCCAGACTCAGCCCCTGTTGATCGTGTTCTGCTTGTCAAATTTGGGGCCGATATGTCTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGTTATTGCCCAGGAGTTTTCCTTATTGGAAAGATCAGAAGCATATTGAAACATATGAAAACATATTAAACAATTTCAAGCACACCCATGACCGTCACAATAATTTTTTTCATTGTGATGGAAGTCAAGATCTTCTTCAAAAAATTTCAGTGCTGATTTTACGGTCAGATCAATACTTTGTCCCTTCTCTTTTTATGATTCCATCGTTTAGAGAAGAACTAAGTAAAATGTTCCCCCAGAAGGACACAGTTTTTCACCATCTTGGACGTTACCTTCTTCACCCATCAAACAAAGCATGGCAAATAATTAGAAAAATTTATGAGGCACATCTAGCCAAGGCAAATGAGAGGATAGGTCTGCAGATTAGACTTTTTAATACTCATCGACTACCACATCAAACTGTTATTAACCAAATAGTATCCTGCACCCTTCAGCATAAGTTGCTGCCTGATTTCAACGCACAAAAGTCAGTGGCTTCTCCTTTGAAGAAGACCTCAAAAGTTGTTTTAGTGGCATCTTTATTCTCAGAATACGGTGAGAAGCTGAAGACTATGTATCAGGCAAATAGAACTGTGACCAGGGAAGTAATAAGAGTTTATCAGCCCAGTCATGAAGAGCGTCAAAAGTCAAATGATGACATGCACAACATCAAGGCATGGACCGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACTAGCACTAAGTCTACTTTTGGTTATGTTGCTCATAGTCTTGGAGGTTTGAAGCCATGGATTTTGCAGAGGGGATATAATGAAACCATCCCAGATCCACCTTGTCGACATGCCAAGTCCATGGAGCCCTGTTTCCATTATCCACCCAAATATGACTGTAGGGCCAATAGCACAGTTGATTTTACTTCCCTTTTTAATCATATGAAGCATTGTGAAGATGTATCTGGTGGATTGAAGCTGGTTAATGGTAATCACTAG 2871 0.365 MGDVGKIFKSFKILLVVAFITFSILVTFFVLHKNSVFDIFKEFNAFIEEKKNLNISEPDKDLKNNTFEAVKDDLSLSTTSGNDKLFGGLLVSSFNESSCISRFQSYLYRKASPHKPSKYLISKLRNYEHLHQRCGPYTKFYNETMENGAKRSNNYVDLRCKYLVWIASDGLGNRMISLVSTFLYAILTNRVLLVRFDVDMLNLFCEPFFDSSWLLPKNSPYWNDLKQFETHETLSMNNKKNNSLEFVPPVLVLDLTHTHVGHTNLFHCDQNQDLLQKVHVMILQSNQYFVPSLFMISSFRQDLNKMFLDKDTIFHYLGRYLFHPSNRVWERIRKLYEANLAKENEKIGLQVRVFNIHHPPTQTITNEIISCVHQAKLLPKFNVQSSMNHHLKNNTSKVVLVVSLYSQYGEKLKSIYESNTSLSREVIKVYQPSHEEQQNSNDDMHNIKAWTEIYLLSLCDALVTSSMSTFGYVAHSLGGLKPWILQPIYGETVPDPPCQRAKYVEPCFHYPPKYACKTNVTVDFTSLFHHITHCEDVSSGVKNSVFDLVHGFNVLAVRAHNASNNVLKQGTQNAITTNVVHEGAQNASIQEFQNATVKTGEEKDHNVIPDSAPVDRVLLVKFGADMSGLFCEPFPDSSWLLPRSFPYWKDQKHIETYENILNNFKHTHDRHNNFFHCDGSQDLLQKISVLILRSDQYFVPSLFMIPSFREELSKMFPQKDTVFHHLGRYLLHPSNKAWQIIRKIYEAHLAKANERIGLQIRLFNTHRLPHQTVINQIVSCTLQHKLLPDFNAQKSVASPLKKTSKVVLVASLFSEYGEKLKTMYQANRTVTREVIRVYQPSHEERQKSNDDMHNIKAWTEIYLLSLCDALVTSTKSTFGYVAHSLGGLKPWILQRGYNETIPDPPCRHAKSMEPCFHYPPKYDCRANSTVDFTSLFNHMKHCEDVSGGLKLVNGNH 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00038 956 Gene3D - 327 482 - -
Vian11g00038 956 Gene3D - 739 893 - -
Vian11g00038 956 FunFam Galactoside 2-alpha-L-fucosyltransferase 158 209 - -
Vian11g00038 956 Pfam Xyloglucan fucosyltransferase 78 517 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vian11g00038 956 Pfam Xyloglucan fucosyltransferase 615 669 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vian11g00038 956 Pfam Xyloglucan fucosyltransferase 665 925 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vian11g00038 956 Gene3D - 158 213 - -
Vian11g00038 956 PANTHER FUCOSYLTRANSFERASE 2-RELATED 17 542 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00038 Vian-Chr11 344298 349337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00038 614 952 Xyloglucan Fucosyltransferase1 AT2G03220 49.036 3.93e-110 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00038 K13681 - gmx:100814715 758.829