Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00037 ATGTGTGGAAAAGAATTTGAATGTTTATATGCTTCTTTATTTGATATTTGCTTTGCATATACATGTTATCAAATTACAGAATGGCTAATAGGGAGATTTGGAAGAGTTTCAGAACATTATTATAATGTATTGATTGAAAGAATTCAGGATACAACTACTAATATACAAAAGACTCGAAATACTATTACAATCCGAGACGGGGAAGAAAAGAATTCCTATATTAGTGAGCCGGTTGCAGATAAAGATTTAGAGAATAATGCATTTAAAGATACAAAGAATAATTTATCTCTATCTACTACTGTTGTTAATGACAAACTACTCAATGGACTTCTAAGTTCCTCATTTGAAGAAGCATCGTGCATTAGTAGGTTTCAGTCTTATTTGTATCAAAAAATTTCTCCTTACAAACCTTCTAAATATTTGATATCCAAGTTACGAAACTATGAACATCTTCATCAAAGTTGTGGACCTTATACTAAATCCTACAATGAAATTATAAAGGAGGGTGCAAAAGTTAGCGAAAATGGTGTTGATTCAAAATGCAAATATTTTATCTGGACAGTTGAAGATGGCTTAGGAAACAGGATGATATCCATGGTTTCAGCATTTCTTTATGCAATCCTTACCGACCGTGTTCTTCTTGTTAGATTTGGTGATGATATGTTGAATCTCTTTTGCGAGCCATTTCCTAATTCTTCATGGTTGTTGCCCAAGAATTCTCCTTATTGGAATAATTTGAAACAATTTGAAACACACAAAATCATCTTTATTGATAACAAGGAAAACAATTCACGAGAGCTTTTGCAACCAGCTCTTGTTATTAATTTAAGGCACACCCATGCTGGCCCTACTAATCGGTTTCATTGTGATAAAAATCAACATCATCTACAAAAGATTCCCGTACTCATTCTACAGTCAAATGAATATTTTGTCCCTACTCTTTATATGGTGTCCTCATTTAGAGAAGACTTCAACAAAATGTTTCCTGACAAAGATACTATTTTCCATCATCTTGGACGCTACCTTTTTCAACCATCAAATGTTGCATGGGAACGAATTCGAAATTTATACGAGGAGCACTTGGCTAAGGAAAATGAAAGGATTGGCTTGCAGATTAGAGTATTTAATACTCGTCAAGCACCACCACAAACCGTTATCGATGAAATTATATCTTGCATCCATCAAAATAAGTTGCTACCAAAATTCAACATGCATAACTTAACGACTCTTTCTTTGAAAAATAATACCTCAAAAGTTGTTCTAGTTGTATCTTTATACTCAAAATATGGTGAAGGGTTAAAGAGGCTATATCAAAATAATACAACTTTGAGTAGAGAAGTAATAAAAGTATATCAGCCAAGTCATGAAGAGCATCAAAATTCACGTACTTTGCCTGAAGAAATTGCTCTTACTGGGTGTTTGAATCTTCCAGAACAACCATCCACACATTCTGCTGAGGCTAATAATGGTGGCCAAATATGCTATAGTGACTTCAACTCTATGCAGACTATTCAAAAAGGTGGAATTCAGCAGTGTAGTAGTCATGGTGGTCCTGTGAATTTTGAGCTGCCGCCATTACCTGGTGAAGTGGAAGCGCCACCGACATCTCTTTCAAATCGCGCCGTCATCGTCGAGAGAGAAAACCAGAGCCACCAGATGGCGTCTCTATATAAAGGGGCAACGCCTGATGCAAAAGGGAGCTGCAACACATTACGGAAAGAACGTTAG 1728 0.3565 MCGKEFECLYASLFDICFAYTCYQITEWLIGRFGRVSEHYYNVLIERIQDTTTNIQKTRNTITIRDGEEKNSYISEPVADKDLENNAFKDTKNNLSLSTTVVNDKLLNGLLSSSFEEASCISRFQSYLYQKISPYKPSKYLISKLRNYEHLHQSCGPYTKSYNEIIKEGAKVSENGVDSKCKYFIWTVEDGLGNRMISMVSAFLYAILTDRVLLVRFGDDMLNLFCEPFPNSSWLLPKNSPYWNNLKQFETHKIIFIDNKENNSRELLQPALVINLRHTHAGPTNRFHCDKNQHHLQKIPVLILQSNEYFVPTLYMVSSFREDFNKMFPDKDTIFHHLGRYLFQPSNVAWERIRNLYEEHLAKENERIGLQIRVFNTRQAPPQTVIDEIISCIHQNKLLPKFNMHNLTTLSLKNNTSKVVLVVSLYSKYGEGLKRLYQNNTTLSREVIKVYQPSHEEHQNSRTLPEEIALTGCLNLPEQPSTHSAEANNGGQICYSDFNSMQTIQKGGIQQCSSHGGPVNFELPPLPGEVEAPPTSLSNRAVIVERENQSHQMASLYKGATPDAKGSCNTLRKER 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00037 575 Gene3D - 178 264 - -
Vian11g00037 575 FunFam Galactoside 2-alpha-L-fucosyltransferase 179 230 - -
Vian11g00037 575 Pfam Xyloglucan fucosyltransferase 99 463 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vian11g00037 575 PANTHER FUCOSYLTRANSFERASE 2-RELATED 89 462 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00037 Vian-Chr11 329105 337673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00037 99 461 Xyloglucan Fucosyltransferase1 AT2G03220 44.262 1.74e-103 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00037 K13681 - gmx:100814715 520.39