Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01753 ATGTCTCTCTTTCTCACTCTCGCACTCTTGAGCACAATCTTGGGCACCACCACTTCCACCAATCTTCCTCGTTCATTTTCATTCCCATATGGTTTGTCGTATCACATCAACTGTGGAAGTCCGACGAACACCACGGATCCGTTCAACACCACGTGGCTGTCGGACCGGTACTTCAGTGGTGGCGCCACCGGGATCGTGTCGGAGCCGCTTAACTTCCACCATGCGCACGAGAAGACTCTCCGCTTCTTCCCAATCTCCTCCGGCAAGAAGAACTGCTACGCCATCCCTTCCCTCCCTCCCTCCCGCTACCTCCTCCGCACATTCGTCGTCTACGACAACTACGACGGCAGGTCCCACCCTCCCTCCTTCGACGTCGCCGTCGCCTCCACTGTCGTATTCTCCTGGCGCTCCCCGTGGCCCCCGTCCCTCGCCCGCGATGGCGCCTACGCCGACCTCTTCGCTACAATTCTCTCCTCAGAAGCCCTAATTTGCTTCTACAGCCTCGCCACGGACCCGCCGGTGATCTCCTCCATTGAGCTCTTCGCAGCCGATCTGGCCTCCTACGACGCCGCCGCAATCGCCGACAACGGCACTGTGCTTGTCAACTACGGGAGACTCTCCTGCGGCTCCGACCAGTGGGGGCCGGGCTTCTCCAACGACTCCGACCTGTTCGGCCGCTCCTGGCAGTCCGATTCGGTATTCCGAACAGGCCAGAGTAAAATCGTAGCCGTATCGACGCGGAACAGCATAAGTGGGGCTGAGGAAAAGCCGAATTACTTCCCGGAGAAACTTTACCAGACGGCGGTGATGACGGCGACGACAGCAGAGGAGAGAGGCGGGGTTTTGGAGTACGAGTTGAGAGTGGACGCAAAGCTTGATTACTTGGTCTGGCTGCATTTCGCTGAGATTGAAGGCCGGGTGAGAAGGGTTGGGGGGAGGGTGTTTGATGTGTACATAAACGGTGATAATTTGACCAGGGTTGATATATACAAGCAAGTTGGGGGTTTTGCGGCGTTTACTTGGCATCACACGGTGAAAAACTTGAGTAGCAGCGTCTTGAGCGTGAAGCTAGTGGGTGTGGTGGGTGCGCCTTTGATCTGTGGGATTGAGAATTACGCTCTGGTGCCTAGTGATCCTTCAACTGTTCCTCAACAAGTGGTTGCCATGAAAGCATTGAAAGATTCACTTCGGGTGCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGTATGAGTAAAGATAATACTGCTTTGGTGATAAGTCAAATTGATTTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGTGGCCAGATTAGTCTTTTGACAGATTTGGTAAGCCTGAATTTGAGTTCTAATTTGTTGACGGGTGAAATACCTTCTGGACTAGGTCAAAAATCCCTGATACACCTGGACTTGTCAAACAATCAGTTAACGGGCTCAATACCTGATAGTATAGGAGCCTCTTCAAGTCTACAGCTCGTGCTATTGAATGGTAACTTATTGGAAGGACAAGTACCAGAACAACTTTATTCGATTGGTGTGCATGGTGGAGCTATAGATCTCTCTGGAAACAAAGGTTTGTGTGGTGTACCATCTCTGCCAGCTTGTCCTATGTTTTGGGAAAACGGAAAATTATCTACTCCGGGTAAAATTGCAATAGGCGTGTCCTGTTCTTTTGTTTTCTGTGCGATACTGCTGCTGGCCTATATTTTCATCAGGAGGAGAAGGAATGACTATGACTTTGCTCTACCTCATGAATTAACATCATTAGCAGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTGATGGTTCTTGAGATGGAGAGTCAACACGCCAAGGGACCACCTTCACATTTTACAACACAATAA 1911 0.5102 MSLFLTLALLSTILGTTTSTNLPRSFSFPYGLSYHINCGSPTNTTDPFNTTWLSDRYFSGGATGIVSEPLNFHHAHEKTLRFFPISSGKKNCYAIPSLPPSRYLLRTFVVYDNYDGRSHPPSFDVAVASTVVFSWRSPWPPSLARDGAYADLFATILSSEALICFYSLATDPPVISSIELFAADLASYDAAAIADNGTVLVNYGRLSCGSDQWGPGFSNDSDLFGRSWQSDSVFRTGQSKIVAVSTRNSISGAEEKPNYFPEKLYQTAVMTATTAEERGGVLEYELRVDAKLDYLVWLHFAEIEGRVRRVGGRVFDVYINGDNLTRVDIYKQVGGFAAFTWHHTVKNLSSSVLSVKLVGVVGAPLICGIENYALVPSDPSTVPQQVVAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGFISGQISLLTDLVSLNLSSNLLTGEIPSGLGQKSLIHLDLSNNQLTGSIPDSIGASSSLQLVLLNGNLLEGQVPEQLYSIGVHGGAIDLSGNKGLCGVPSLPACPMFWENGKLSTPGKIAIGVSCSFVFCAILLLAYIFIRRRRNDYDFALPHELTSLAAKRNRYQRQKSLMVLEMESQHAKGPPSHFTTQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01753 636 PANTHER OS07G0107800 PROTEIN-RELATED 35 605 - -
Vian10g01753 636 FunFam Di-glucose binding protein with Leucine-rich repeat domain 205 372 - -
Vian10g01753 636 FunFam Putative LRR receptor-like serine/threonine-protein kinase 383 550 - -
Vian10g01753 636 ProSiteProfiles Leucine-rich repeat profile. 479 501 IPR001611 GO:0005515
Vian10g01753 636 SUPERFAMILY L domain-like 381 525 - -
Vian10g01753 636 Gene3D Ribonuclease Inhibitor 384 551 IPR032675 -
Vian10g01753 636 Gene3D - 204 373 - -
Vian10g01753 636 Gene3D - 31 183 - -
Vian10g01753 636 Pfam Malectin-like domain 36 373 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01753 Vian-Chr10 29232221 29245184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01753 38 616 Receptor kinase-like Gene Family AT2G14440 26.656 1.23e-37 147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01753 10 29232221 29245184 Vian10g01753 10 29232221 29245184 ECH