Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01734 ATGAGGAACTTCAAGGCTTTTGGTCATGTCATCATTGCTCTCTTCATCATCTCTCTGAGTGCTTGGTGTCATGGACAAGTAGAACTTGACAAAGCTCCTATGGAGAAGGCTGAGAAAGATGCTCTATTCTCCACCATTCAAGGTTTTGTTGGTAACTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTGAGGGGGTTTCTTGTGATCTGTTTGACGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCTACGAGAATTCTCTAAGTTGTGCCAAAAATTTGGAGTTCAGACCACATTTGTTTGAGCTGAAGCACCTCAAAACTCTATCCCTATTCAAATGCTTTAGATCACAACGCAGGCATCAGGTTACAATCCCCAATGCAAACTGGGAAAATCTGGCTGGCAGCTTAAGATCACTTGAGTTTAGATCAAACACAGGTCTCATTGGAAAAATCCCTTCAAGTTTTGGTGTCCTAAAGAAGCTTCAGTCCCTAGTACTGTTAGAAAATGGTTTAACAGGTGAAATTCCACCAGAGATTGGCAACCTGAAAAAGTTGAATCGGCTTGTCATTGCAGAAAACTATCTCAGTGGACACATTCCAGATATTTTTACTGCACTGGGTGACTTGTTGATACTTGATTTGAGTAGAAACTCACTATCCGGGTCTTTACCTTTAACACTTGGATGCTTAACCTCCCTTTTGAAGCTTGATGTTAGCAATAACCATTTGGAGGGGAATTTGTTGAAAGAATTTGCTTATCTGAAGAATCTGACCCTTTTGGACCTTGGGAATAACAGATTCTCTGGTGGGTTGACATTGAGCATTCAAGAGATGCATTCTTTGGAGGAAATGGTTTTGTCCAACAATGCAATAGGTGGAGATATCAGGATCCTGAAGTGGGAAAACCTTCATAACTTGGTCAGTTTGGATCTCTCTAACATGGGCTTAAATGGGGAAATTCCTGAGTCTATAATACAATTGAAGAGGTTGAGATTTCTACGCCTCAGTGACAACAACCTCACAGGCAACCTTTCACCAAAACTATCAACTCTTCCTTCTCTCAATGCACTCTATGTTAGTGGTAACAATCTTGCAGGAGAGCTTAAATTCTCTATGGAGTTTTATGGAAAAATGGGAACACGTTTTGGAGCCTGGAACAACCCCAACCTTTGTTGCCCTCTTGGAGCAATTGCAACAAGTAATGTTCCATTTGGGGTAAAACCATGCCAGCAGCAGATCAAATTGGTAGAATCTAACACAAATGGTAGTGATGTTAACAAGACTTTCTATTCAATAGCCTCTTTGTGCCATGCTCCTAATCACTTCTGGTGGACTTTTCCATTCATCATGATTCTCTTCCTAAATTCTTATATAATAGGTCTTTAA 1413 0.4062 MRNFKAFGHVIIALFIISLSAWCHGQVELDKAPMEKAEKDALFSTIQGFVGNWWNGSDLYPDPCGWTPIEGVSCDLFDGFWYVTVLNIGPIYENSLSCAKNLEFRPHLFELKHLKTLSLFKCFRSQRRHQVTIPNANWENLAGSLRSLEFRSNTGLIGKIPSSFGVLKKLQSLVLLENGLTGEIPPEIGNLKKLNRLVIAENYLSGHIPDIFTALGDLLILDLSRNSLSGSLPLTLGCLTSLLKLDVSNNHLEGNLLKEFAYLKNLTLLDLGNNRFSGGLTLSIQEMHSLEEMVLSNNAIGGDIRILKWENLHNLVSLDLSNMGLNGEIPESIIQLKRLRFLRLSDNNLTGNLSPKLSTLPSLNALYVSGNNLAGELKFSMEFYGKMGTRFGAWNNPNLCCPLGAIATSNVPFGVKPCQQQIKLVESNTNGSDVNKTFYSIASLCHAPNHFWWTFPFIMILFLNSYIIGL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01734 470 FunFam Piriformospora indica-insensitive protein 2 306 407 - -
Vian10g01734 470 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 106 428 - -
Vian10g01734 470 SUPERFAMILY L domain-like 44 377 - -
Vian10g01734 470 Gene3D Ribonuclease Inhibitor 36 210 IPR032675 -
Vian10g01734 470 PRINTS Leucine-rich repeat signature 239 252 - -
Vian10g01734 470 PRINTS Leucine-rich repeat signature 218 231 - -
Vian10g01734 470 Pfam Leucine rich repeat 193 252 IPR001611 GO:0005515
Vian10g01734 470 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Vian10g01734 470 Gene3D Ribonuclease Inhibitor 211 306 IPR032675 -
Vian10g01734 470 FunFam Piriformospora indica-insensitive protein 2 209 305 - -
Vian10g01734 470 FunFam Piriformospora indica-insensitive protein 2 37 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01734 Vian-Chr10 29027818 29029805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01734 145 427 Receptor kinase-like Gene Family AT1G73080 35.922 3.56e-33 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01734 10 29027818 29029805 Vian10g01734 10 29027818 29029805 ECH