Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01733 ATGACGGACATCACTGACGACATAGCCGAGGAAATTTCCTTCCAAGGCTTCGACGATGACTGCAATATGCTCGGAAGCCTTCTCAACGACATTTTGCAAAGAGAGGCTGGTCTAATCTTCGTTGACAAGCTTGAAAAAATTCGAGTCCTTGCTCAGAGTGCTTGTAATATGAGAAATGCGGGGATTGAAGACATGGCTGAGCTGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACACTAGAAGAAGCTCTCACACTTGCTCGTGCCTTTAGCCATTATCTTACTTTGATGGGTATTGCTGAAACTCACCATAGGGTTCGCAAAGGAGGAAACATAGCTCTTTTTGCAAAATCTTGTGATGACATCTTTAACCAGCTGTTGCAAGATGGAGTTACTCCAGAGGAGCTTTATAACTCGGTTTGCAAGCAGGTGAGAGAGATAACTTCAATATGGCTGACAGATGAACTTAGGCGTGAGAAACCCACACCAGTCGATGAAGCCAGGGCCGGGTTGAATATTGTGGAACAATCACTCTGGAAAGCCGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACACCAATAAAGTTTGGATCTTGGATGGGAGGTGATAGGGATGGAAACCCAAATGTGACAGCTAAGGTATCAAAAGATGTTTCACTTCTGTCTAGATGGATGGCAATTGACCTCTACGTTCGGGAACTGGATAGCCTGAAATTTGAACTATCCATGAAACGGTGCAGCGATAAGTTGTCGAAATTGGCACATGAAATTCTAGAAGAAAAAGGTGGATCTGAGCATCCAAGACTCATTCCAGGAGCTGATCACAAGCAATTCAATCCCAAGGGTGGCGAGATTTCAAGTTCCACTGAAAGCACTATGTGCAGTACCCATGTCCGTTCACCAATACTAATGTCACCAAGTTCCAGTGCTGCTTCATTAGCTTCAATGTCACGCTCTCCTTCTTTCAACTCTAGTCAACAACTTCTTGCTCAGAGGAAACTGTTTGCAGAATCCCAGATAGGAAGGACCAGTTTCCATAGGCTTTTGGAGCCAAAGCTCCCTCAGCATCCTACAATTGCTCCTTATAGAGTTGTTCTTGGAAATGTAAAAGATAAGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTATTGATCTCATAAGAAGAGTCACTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGCCAGGAATCAGGCAGACATGCCGAAACGCTTGATGCAGTTACAAGGTATTTGGACTTGGGTACATACAGTGAGTGGGATGAAGAAAAGAAACTGAACTTCTTAACTAGAGAGCTGAAAGGGAAAAGACCACTGGTTCCCCCTAGTATAGAGGTTGTTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACTGCTGCTGAGTTAGGAAGCGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCCAGTGATGTTCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGACTTGCTGTCAGTGGAGAGTTAGGAAGAGCTTGTCCAGGTGGAACGCTGCGGGTGGCTCCTCTATTTGAAACTGTAAAGGACCTAAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGACAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAAGATGTTGTAGCTGCATGCAAGGAGTATGGAATTAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGCCGCGGTGGTGGTCCAACATATATGGCCATTCAGTCTCAACCACCTGGCTCTGTGATGGGAACCCTTCGTACAACAGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAAACAGCTGTTAGGCAACTTGAGATCTACACAACAGCCGTGTTACTTGCTACCCTTCGTCCTCCTCTCCCACCGCGTGAAGAAAAGTGGCGCAATATGATGGAAGAGATTTCAAAGCTCAGTTGCCAATGTTACCGTAGTGTAGTGTATGAAAATCCAGAATTTCTGTCATACTTCCATGAAGCCACCCCTCAATCAGAGCTTGGCTTCCTCAACATCGGTAGCCGCCCCACAAGGCGAAAGAGCACCATCGGAATTGGACACCTCCGAGCCATTCCCTGGGTGTTTGCATGGACTCAAACTAGGTTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGGTTGAAAGGTGCTTGTGAGAAAGGACAAACTGAAGAACTAAAGGCCATGTACAAAGAGTGGCCTTTCTTTCAAAGCACCATAGACTTGATTGAGATGGTTCTGGGAAAAGCAGACATTCCTATTGCAAGGCACTATGACGAAGTTCTTGTCTCAGAGAAGAGACAACAAATTGGAGGTCAACTGAGGGATGAGCTTGTCCAAACTGGCAAGTTTGTGTTAGCTGTTAGTGGGCATGAGAAACCTCAGCAGAATAATAGGAGCTTGAGGAAACTGATTGAGAGTAGGCTTCCCTTCCTCAATCCCTTGAACATGTTGCAGGTAGAGATACTGAAGAGGCTAAGGAGTGATGATGACAACCTTAAAGCAAGAGATGCTTTGCTCATCACCATAAATGGCATTGCTGCTGGGATGAGGAACACTGGTTAA 2760 0.4551 MTDITDDIAEEISFQGFDDDCNMLGSLLNDILQREAGLIFVDKLEKIRVLAQSACNMRNAGIEDMAELLEKQLASELSKMTLEEALTLARAFSHYLTLMGIAETHHRVRKGGNIALFAKSCDDIFNQLLQDGVTPEELYNSVCKQVREITSIWLTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVSKDVSLLSRWMAIDLYVRELDSLKFELSMKRCSDKLSKLAHEILEEKGGSEHPRLIPGADHKQFNPKGGEISSSTESTMCSTHVRSPILMSPSSSAASLASMSRSPSFNSSQQLLAQRKLFAESQIGRTSFHRLLEPKLPQHPTIAPYRVVLGNVKDKQSCGSGVLADGRLIDLIRRVTTFGMVLMKLDLRQESGRHAETLDAVTRYLDLGTYSEWDEEKKLNFLTRELKGKRPLVPPSIEVVPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVAPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRTTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNMMEEISKLSCQCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSTIGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGQTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIARHYDEVLVSEKRQQIGGQLRDELVQTGKFVLAVSGHEKPQQNNRSLRKLIESRLPFLNPLNMLQVEILKRLRSDDDNLKARDALLITINGIAAGMRNTG 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01733 919 PRINTS Phosphoenolpyruvate carboxylase signature 617 646 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 PRINTS Phosphoenolpyruvate carboxylase signature 750 776 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 PRINTS Phosphoenolpyruvate carboxylase signature 153 169 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 PRINTS Phosphoenolpyruvate carboxylase signature 575 595 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 PRINTS Phosphoenolpyruvate carboxylase signature 212 227 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 Pfam Phosphoenolpyruvate carboxylase 390 919 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 Pfam Phosphoenolpyruvate carboxylase 126 271 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 919 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 577 589 IPR033129 -
Vian10g01733 919 Gene3D Phosphoenolpyruvate/pyruvate domain 240 390 - -
Vian10g01733 919 MobiDBLite consensus disorder prediction 280 305 - -
Vian10g01733 919 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 389 919 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vian10g01733 919 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 919 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01733 Vian-Chr10 28997065 29008300 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01733 10 28997065 29008300 Vian10g01733 10 28997065 29008300 ECH