Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01731 ATGGTGAAGTTCTCAAAGCAGTTCGAGGGGCAACTCATTCCAGAATGGAAAGAGGCCTTTGTGGATTATTGGCAACTCAAGAAGGACCTCAAAAAACTCCATCTTTTTAATAACACACCCAACACTAGTAGTACTTCTCTACCTAAGTACATATTTTCATCACTAAGGAACTACTCTCCATTTGGCCACCAACATAGACAGCATGGACCGATACAAGTCCGTAGGAAACTTGCCTCATCATCTTTTAATGGGGACATGTATGAGACAGAACTGCTAGATCAGTTTTCTGACACTGATGCCACCAAAGAATTTTTTGCATGTCTGGACCAGCAACTAAACAAGGTCAACAAGTTCTACAGAACCAAGGAGAAAGAGTTCATGGATAGAGGAGATTCCTTGAAAAAACAAATGGAAATCCTCCTTGTGCTCAAATCCACATTCAAGGAGCAGCAGAGCAAAGCAGGCTCTTCCCATGGCTCCAAGGAAGATCAATCTATCTCATGCACATTCTCTAATGAGGAGGACTCTGTTAGGAGCAGACCACAGCAAGAAGAACTACAGGACACAACAAGCACAGATGAATTGGAGAGAGTTGAAGCTCCATTTTCTGATTCCCCTAGTGCAGAAGAACTTGTCAAGTCTTTGCAAATGAAAAGAGAAGATGGTAAATTCAGAACTCTTTCTGGCCGTGTCATCAACTGCCAAGGGAAAAATCTGAGGATAAACATTCCCTTGACCACACCATCCAGAACCTTTTCAGCCATAAGCTACCTTCTCAGGGAAGATTTGCTTAATCAGTCTTCAAGGAAATGTGGTCCAGAAGGTGGAAACATCCACCTGAACAAAACTAATTTGCACCATGCTGAAAAGATGATCAAAGGAGGTTTCATTGAGCTCTACAAAGGCCTAGGATATCTCAAAGTTTACAGGAACTTGAACATGCTTGCATTTATAAAGATTCTGAAGAAGTTTGATAAGGTCACAGAAAAACAAATTCTTCCCATTTATCTCAAAGTGGTTGAGAGTTCTTATTTCAATAGCTCAGATAAGGTGGTGAAGTTAGCAGACGAAGTTGAGGAACTGTTCATTAAAAATTTTGCTGAAGATAACCGAAGAAAGGCCATGAAATACCTTAGACCAAGCCAACGTAAAGAATCACATGCTGTAACTTTTTTCATTGGACTATTTACTGGATGCTTCTTGGCACTTCTTGCGGGATATGCTATAATGGCTCATGTGACTGGTTTGTATAGACCACATCAAAATTCTGTCTACATGGAAACTGTCTACCCTGTGCTTAGCATGTTCAGCCTTGTGTTCCTACATTTCTTTCTTTATGGTTGCAACATTCTTGCATGGAGAAAAACTCGTATAAACTACAGCTTCATTTTTGAGCTGGCCCCTACCAAGGAACTCAAGTATAGAGATATATTCTTAATTTGCACGATGGCAATGAGTACTGTGGTTGGTGTTACGTTTCTTCATTTGACTCTACTGACAAAAGGGTATTCATATGCCAAAGTACAAGACATTCCCGGACTTCTTCTTCTGGGCTTCTTATTAATACTAGTGTGCCCCTTCAACATTATATACCGGTCAAGCCGTTACCGCTTCCTTTGTGTGATAAGAAACATAATTTTGTCACCCCTTTACAAGGTTGTCATGCTGGATTTTTTCATGGCTGATCAACTTTGTAGTCAGGTACCAATGCTCAGGAGCCTTGAGTACGTGGCATGTTACTATATAACCGGTAGCTATAAAACTCAGGACTATGGATACTGCATGAGGACAAAGCACTATAGAGATCTAGCTTATGCAGTGTCATTTCTCCCCTACTATTGGAGAGCTATGCAGTGTACTAGGAGATGGGTTGATGAAGGGCAGACAAGCCACCTTGTGAATCTGGGAAAATATGTATCAGCAATGTTAGCAGCTGGTGCCAAAGTGGCTTATGAGAAAGATGGGAGTGTAGTATGGCTCTGTGTTCTGGTGATAATGTCAAGTGCAGCAACTATGTACCAATTGTACTGGGACTTTGTAAAAGACTGGGGTTTGCTTCAAATGAATTCCAAGAATCCATGGTTAAGGAATGAATTAATGCTTCACAGAAAAGCCATTTACTACTTCTCAATGGGGTTAAATCTTGTTCTGAGGCTTGCTTGGTTGCAAACTGTTCTTCATTCAAGTTTTGAAAATGTTGATTATCGAGTTACATGCTTATTTTTAGCATCTCTTGAAGTAATTAGACGAGGGCTATGGAATTTCTTCAGATTGGAGAATGAGCATCTAAATAATGCTGGCAAGTTTAGAGCAGTGAAGATAGTACCACTTCCTTTTCATGAAGTTGATGAAGAAGACTAA 2361 0.4036 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKLHLFNNTPNTSSTSLPKYIFSSLRNYSPFGHQHRQHGPIQVRRKLASSSFNGDMYETELLDQFSDTDATKEFFACLDQQLNKVNKFYRTKEKEFMDRGDSLKKQMEILLVLKSTFKEQQSKAGSSHGSKEDQSISCTFSNEEDSVRSRPQQEELQDTTSTDELERVEAPFSDSPSAEELVKSLQMKREDGKFRTLSGRVINCQGKNLRINIPLTTPSRTFSAISYLLREDLLNQSSRKCGPEGGNIHLNKTNLHHAEKMIKGGFIELYKGLGYLKVYRNLNMLAFIKILKKFDKVTEKQILPIYLKVVESSYFNSSDKVVKLADEVEELFIKNFAEDNRRKAMKYLRPSQRKESHAVTFFIGLFTGCFLALLAGYAIMAHVTGLYRPHQNSVYMETVYPVLSMFSLVFLHFFLYGCNILAWRKTRINYSFIFELAPTKELKYRDIFLICTMAMSTVVGVTFLHLTLLTKGYSYAKVQDIPGLLLLGFLLILVCPFNIIYRSSRYRFLCVIRNIILSPLYKVVMLDFFMADQLCSQVPMLRSLEYVACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCTRRWVDEGQTSHLVNLGKYVSAMLAAGAKVAYEKDGSVVWLCVLVIMSSAATMYQLYWDFVKDWGLLQMNSKNPWLRNELMLHRKAIYYFSMGLNLVLRLAWLQTVLHSSFENVDYRVTCLFLASLEVIRRGLWNFFRLENEHLNNAGKFRAVKIVPLPFHEVDEED 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01731 786 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 782 - -
Vian10g01731 786 Pfam SPX domain 2 340 IPR004331 -
Vian10g01731 786 ProSiteProfiles EXS domain profile. 595 786 IPR004342 GO:0016020
Vian10g01731 786 CDD SPX_PHO1_like 3 334 IPR034092 -
Vian10g01731 786 Pfam EXS family 430 763 IPR004342 GO:0016020
Vian10g01731 786 MobiDBLite consensus disorder prediction 151 176 - -
Vian10g01731 786 MobiDBLite consensus disorder prediction 151 209 - -
Vian10g01731 786 ProSiteProfiles SPX domain profile. 2 338 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01731 Vian-Chr10 28903706 28909441 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01731 10 28903706 28909441 Vian10g01731 10 28903706 28909441 ECH